RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 OCM2P0CE71 109 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 ZNF250P15622 560 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 SELEP16581 610 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 LOXP28300 417 aaPredicted RBP6.87□□□□□ -1.31
COPS3-215ENST00000578317 EVX1P49640 407 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 RPS23P62266 143 aaKnown RBP6.87□□□□□ -1.31
COPS3-215ENST00000578317 BSPH1Q075Z2 132 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 RIPPLY1Q0D2K3 151 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 CTF1Q16619 201 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 ZNF718Q3SXZ3 478 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 ADAM5Q6NVV9 412 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 SLC16A12Q6ZSM3 486 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 RFPL4BQ6ZWI9 263 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 CEACAM19Q7Z692 300 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 CLVS1Q8IUQ0 354 aaPredicted RBP6.87□□□□□ -1.31
COPS3-215ENST00000578317 SERPINA12Q8IW75 414 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 OR51A4Q8NGJ6 313 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 OR1J1Q8NGS3 322 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 OR10AC1Q8NH08 325 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 KLF14Q8TD94 323 aaPredicted RBP6.87□□□□□ -1.31
COPS3-215ENST00000578317 TMEM171Q8WVE6 324 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 DERL3Q96Q80 235 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 OR2J1Q9GZK6 312 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 ZNF442Q9H7R0 627 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 TXNL4BQ9NX01 149 aaKnown RBP6.87□□□□□ -1.31
COPS3-215ENST00000578317 KCNN3Q9UGI6 736 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 DHDHQ9UQ10 334 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 N6AMT1Q9Y5N5 214 aa6.87□□□□□ -1.31
COPS3-215ENST00000578317 UTP20O75691 2785 aaKnown RBP6.86□□□□□ -1.31
COPS3-215ENST00000578317 FASNP49327 2511 aaKnown RBP6.86□□□□□ -1.31
COPS3-215ENST00000578317 TRAV1-2A0A0B4J238 106 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 A0A1B0GWJ7 208 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 TRIM64BA6NI03 449 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 CD300LBA8K4G0 201 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 C19orf84I3L1E1 186 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 PIN1P1O15428 100 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 CST4P01036 141 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 IGHV3-13P01766 116 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 CD37P11049 281 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 KITLGP21583 273 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 PSG7Q13046 419 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 TNK1Q13470 666 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 SNTB1Q13884 538 aaKnown RBP6.86□□□□□ -1.31
COPS3-215ENST00000578317 INSL4Q14641 139 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 ODF4Q2M2E3 257 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 TMEM42Q69YG0 159 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 ZNF529Q6P280 563 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 SLC22A25Q6T423 547 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 UTS2BQ765I0 119 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 MRPL21Q7Z2W9 205 aaKnown RBP6.86□□□□□ -1.31
COPS3-215ENST00000578317 FTMTQ8N4E7 242 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 CSNK2A3Q8NEV1 391 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 SEMA6DQ8NFY4 1073 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 OR5D14Q8NGL3 314 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 OR2AE1Q8NHA4 323 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 SLC25A40Q8TBP6 338 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 PP6455Q8WZ26 134 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 PIGTQ969N2 578 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 TMEM106AQ96A25 262 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 FGGYQ96C11 551 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 CMBLQ96DG6 245 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 TRMT61AQ96FX7 289 aaKnown RBP6.86□□□□□ -1.31
COPS3-215ENST00000578317 CHCHD6Q9BRQ6 235 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 SOX7Q9BT81 388 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 PPIL3Q9H2H8 161 aaKnown RBP6.86□□□□□ -1.31
COPS3-215ENST00000578317 CA10Q9NS85 328 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 FOXJ3Q9UPW0 622 aa6.86□□□□□ -1.31
COPS3-215ENST00000578317 IGLV3-9A0A075B6K5 115 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 IQCF6A8MYZ5 107 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 SHISA9B4DS77 424 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 ATP6V1G2-DDX39BF2Z307 99 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 SLC22A1O15245 554 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 PSPNO60542 156 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 LPLP06858 475 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 FAHP16930 419 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 IGFBP3P17936 291 aaPredicted RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 SRMP19623 302 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 ACKR3P25106 362 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 THBS4P35443 961 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 PSMD7P51665 324 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 SNTB2Q13425 540 aaKnown RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 MOGQ16653 247 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 HSD17B12Q53GQ0 312 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 RGS7BPQ6MZT1 257 aaPredicted RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 TPRA1Q86W33 373 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 CDH26Q8IXH8 852 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 OR13C3Q8NGS6 347 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 OR13C5Q8NGS8 318 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 SYNPRQ8TBG9 265 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 RPL3LQ92901 407 aaKnown RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 ISOC1Q96CN7 298 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 ADAT3Q96EY9 351 aaPredicted RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 FAM71F1Q96KD3 344 aaPredicted RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 KCTD7Q96MP8 289 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 TECTBQ96PL2 329 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 OR14A2Q96R54 314 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 CENPOQ9BU64 300 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 NAA50Q9GZZ1 169 aaKnown RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 NOX4Q9NPH5 578 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 SNTG1Q9NSN8 517 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms