RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 TNFSF4P23510 183 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 COL8A2P25067 703 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 GNALP38405 381 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 EFNA4P52798 201 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 RPS11P62280 158 aaKnown RBP eCLIP7.26□□□□□ -1.25
NUP88-211ENST00000575976 MLLT11Q13015 90 aaPredicted RBP7.26□□□□□ -1.25
NUP88-211ENST00000575976 HNRNPA0Q13151 305 aaKnown RBP7.26□□□□□ -1.25
NUP88-211ENST00000575976 MAB21L1Q13394 359 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 TPBGQ13641 420 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 CEP78Q5JTW2 689 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 CLVS2Q5SYC1 327 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 ZBTB37Q5TC79 503 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 UBE2UQ5VVX9 321 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 LIPKQ5VXJ0 399 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 TMEM42Q69YG0 159 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 KCTD8Q6ZWB6 473 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 ZDHHC23Q8IYP9 409 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 FTMTQ8N4E7 242 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 TSPAN14Q8NG11 270 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 OR13C3Q8NGS6 347 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 OR8S1Q8NH09 359 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 GPR148Q8TDV2 347 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 UBASH3BQ8TF42 649 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 TSEN15Q8WW01 171 aaKnown RBP7.26□□□□□ -1.25
NUP88-211ENST00000575976 ITLN1Q8WWA0 313 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 UFD1Q92890 307 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 MEGF10Q96KG7 1140 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 OR2V2Q96R30 315 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 FGF23Q9GZV9 251 aaPredicted RBP7.26□□□□□ -1.25
NUP88-211ENST00000575976 CXXC4Q9H2H0 198 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 PLEKHA1Q9HB21 404 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 GPR173Q9NS66 373 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 ZNF275Q9NSD4 429 aaPredicted RBP7.26□□□□□ -1.25
NUP88-211ENST00000575976 DECR2Q9NUI1 292 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 TREM2Q9NZC2 230 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 IL19Q9UHD0 177 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 DHDHQ9UQ10 334 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 NOP16Q9Y3C1 178 aaKnown RBP7.26□□□□□ -1.25
NUP88-211ENST00000575976 MPC1Q9Y5U8 109 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 A0A087WXM4 84 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.25□□□□□ -1.25
NUP88-211ENST00000575976 TRBV5-5A0A0J9YX44 114 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 LOC100289279A0A1B0GTE1 492 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 ANKRD61A6NGH8 418 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 ANXA2P2A6NMY6 339 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 CDC14BO60729 498 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 INMTO95050 263 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 NRASP01111 189 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 GRPP07492 148 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 RPSAP08865 295 aaKnown RBP7.25□□□□□ -1.25
NUP88-211ENST00000575976 OCM2P0CE71 109 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 DAOP14920 347 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 CPEP16870 476 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 ZNF20P17024 532 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 HOXB4P17483 251 aaPredicted RBP7.25□□□□□ -1.25
NUP88-211ENST00000575976 PSMB9P28065 219 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 THBS2P35442 1172 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 RBMXP38159 391 aaKnown RBP7.25□□□□□ -1.25
NUP88-211ENST00000575976 CD200P41217 278 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 SRP9P49458 86 aaKnown RBP7.25□□□□□ -1.25
NUP88-211ENST00000575976 GPR50Q13585 617 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 INSL4Q14641 139 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 UBE2V2Q15819 145 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 NEDD8Q15843 81 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 SSX1Q16384 188 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 YIF1BQ5BJH7 314 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 ARMCX4Q5H9R4 360 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 PRAMEF6Q5VXH4 476 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 PLCXD3Q63HM9 321 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 WDR86Q86TI4 376 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 TGIF2LYQ8IUE0 185 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 PHC2Q8IXK0 858 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 SPERTQ8NA61 448 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 HPSE2Q8WWQ2 592 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 OR5P3Q8WZ94 311 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 FCGR1BQ92637 280 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 RDH5Q92781 318 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 YIPF5Q969M3 257 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 TMEM203Q969S6 136 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 C10orf35Q96D05 121 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 ITPKCQ96DU7 683 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 RNF170Q96K19 258 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 HIST1H2AAQ96QV6 131 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 FOXC2Q99958 501 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 MICU1Q9BPX6 476 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 TMED9Q9BVK6 235 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 EGLN1Q9GZT9 426 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 SAP30LQ9HAJ7 183 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 BARX1Q9HBU1 254 aaPredicted RBP7.25□□□□□ -1.25
NUP88-211ENST00000575976 SF3B6Q9Y3B4 125 aaKnown RBP7.25□□□□□ -1.25
NUP88-211ENST00000575976 CACNG2Q9Y698 323 aa7.25□□□□□ -1.25
NUP88-211ENST00000575976 IGKV1-9A0A0C4DH69 117 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 IGHV1-69-2A0A0G2JMI3 117 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 A0A1W2PPK0 400 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 TRIM64CA6NLI5 447 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ZNF732B4DXR9 585 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 PTBP3O95758 552 aaKnown RBP7.24□□□□□ -1.25
NUP88-211ENST00000575976 SERPINA3P01011 423 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 SMIM18P0DKX4 95 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ATF1P18846 271 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms