RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 EFNA4P52798 201 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 RPS11P62280 158 aaKnown RBP eCLIP14.51□□□□□ -0.09
NUP88-210ENST00000574867 SYT6Q5T7P8 510 aaPredicted RBP14.51□□□□□ -0.09
NUP88-210ENST00000574867 PARP16Q8N5Y8 322 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 MUL1Q969V5 352 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 ITPKCQ96DU7 683 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 HIST1H2AAQ96QV6 131 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 C14orf119Q9NWQ9 140 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 NAV2Q8IVL1 2488 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 POLQO75417 2590 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 H0YL77 283 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 TPD52L2O43399 206 aaKnown RBP14.51□□□□□ -0.09
NUP88-210ENST00000574867 TNFRSF1AP19438 455 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 MAPK3P27361 379 aaPredicted RBP14.51□□□□□ -0.09
NUP88-210ENST00000574867 GABRA5P31644 462 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 CD200P41217 278 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 ATP5J2P56134 94 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 CCL8P80075 99 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 PLCXD3Q63HM9 321 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 UTS2BQ765I0 119 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 OR13C5Q8NGS8 318 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 TMEM106AQ96A25 262 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 FGGYQ96C11 551 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 ADAT3Q96EY9 351 aaPredicted RBP14.51□□□□□ -0.09
NUP88-210ENST00000574867 MICU1Q9BPX6 476 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 RTL8AQ9BWD3 113 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 CXXC4Q9H2H0 198 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 NDUFB11Q9NX14 153 aa14.51□□□□□ -0.09
NUP88-210ENST00000574867 ITPR2Q14571 2701 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 F5H5P2 479 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 CCRL2O00421 344 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 INMTO95050 263 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 F12P00748 615 aaPredicted RBP14.5□□□□□ -0.09
NUP88-210ENST00000574867 SMIM18P0DKX4 95 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 CEACAM21Q3KPI0 293 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 SERPINA12Q8IW75 414 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 OR5P3Q8WZ94 311 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 DVL3Q92997 716 aaPredicted RBP14.5□□□□□ -0.09
NUP88-210ENST00000574867 OR2V2Q96R30 315 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 TMED9Q9BVK6 235 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 MRPS26Q9BYN8 205 aaKnown RBP14.5□□□□□ -0.09
NUP88-210ENST00000574867 ZNF879B4DU55 563 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 NCR1O76036 304 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 IGHV4-39P01824 125 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 SOX2P48431 317 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 MRPS11P82912 194 aaKnown RBP14.5□□□□□ -0.09
NUP88-210ENST00000574867 CNN3Q15417 329 aaKnown RBP14.5□□□□□ -0.09
NUP88-210ENST00000574867 OR5D14Q8NGL3 314 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 HPSE2Q8WWQ2 592 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 PERPQ96FX8 193 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 MEGF10Q96KG7 1140 aa14.5□□□□□ -0.09
NUP88-210ENST00000574867 MYOZ1Q9NP98 299 aaPredicted RBP14.5□□□□□ -0.09
NUP88-210ENST00000574867 USF3Q68DE3 2245 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 A6NIN4 97 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 OR5B21A6NL26 309 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 PTBP3O95758 552 aaKnown RBP14.49□□□□□ -0.09
NUP88-210ENST00000574867 JUNBP17275 347 aaPredicted RBP14.49□□□□□ -0.09
NUP88-210ENST00000574867 SSX1Q16384 188 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 CEP78Q5JTW2 689 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 MOB3CQ70IA8 216 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 OR5A2Q8NGI9 324 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 ITLN1Q8WWA0 313 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 OR14A2Q96R54 314 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 PPP1R3EQ9H7J1 279 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 GPR173Q9NS66 373 aa14.49□□□□□ -0.09
NUP88-210ENST00000574867 TMEM210A6NLX4 147 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 HPXP02790 462 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 GATA4P43694 442 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 GP2P55259 537 aaKnown RBP14.48□□□□□ -0.09
NUP88-210ENST00000574867 RPS25P62851 125 aaKnown RBP14.48□□□□□ -0.09
NUP88-210ENST00000574867 MAB21L1Q13394 359 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 DERL3Q96Q80 235 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 ZCCHC4Q9H5U6 513 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 NEK6Q9HC98 313 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 CKLFQ9UBR5 152 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 SLC7A11Q9UPY5 501 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 SF3B6Q9Y3B4 125 aaKnown RBP14.48□□□□□ -0.09
NUP88-210ENST00000574867 NDUFS7O75251 213 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 SC5DO75845 299 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 RGS9O75916 674 aaPredicted RBP14.48□□□□□ -0.09
NUP88-210ENST00000574867 FSTP19883 344 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 GNG3P63215 75 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 ERGIC1Q969X5 290 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 SPSB1Q96BD6 273 aa14.48□□□□□ -0.09
NUP88-210ENST00000574867 TANC2Q9HCD6 1990 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 TRBV5-7A0A0A0MS05 114 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 ALX3O95076 343 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 DAOP14920 347 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 UBE2V2Q15819 145 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 ACSM3Q53FZ2 586 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 PHYHIPQ92561 330 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 RDH5Q92781 318 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 TMEM203Q969S6 136 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 RNF170Q96K19 258 aa14.47□□□□□ -0.09
NUP88-210ENST00000574867 CHD3Q12873 2000 aaKnown RBP14.47□□□□□ -0.09
NUP88-210ENST00000574867 IGHV1-69-2A0A0G2JMI3 117 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 LOC100289279A0A1B0GTE1 492 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 IFNL4K9M1U5 179 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 SULT1B1O43704 296 aa14.46□□□□□ -0.09
NUP88-210ENST00000574867 CSF3P09919 207 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms