RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MXRA7P84157 204 aa16.1■□□□□ 0.17
CCDC40-206ENST00000572083 OR5D13Q8NGL4 314 aa16.1■□□□□ 0.17
CCDC40-206ENST00000572083 ANGPTL6Q8NI99 470 aa16.1■□□□□ 0.17
CCDC40-206ENST00000572083 RPL3LQ92901 407 aaKnown RBP16.1■□□□□ 0.17
CCDC40-206ENST00000572083 MED30Q96HR3 178 aa16.1■□□□□ 0.17
CCDC40-206ENST00000572083 C7orf34Q96L11 122 aa16.1■□□□□ 0.17
CCDC40-206ENST00000572083 DHRS1Q96LJ7 313 aa16.1■□□□□ 0.17
CCDC40-206ENST00000572083 RHBDD3Q9Y3P4 386 aa16.1■□□□□ 0.17
CCDC40-206ENST00000572083 hCG_38984A0A1B0GV85 526 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 ZNF878C9JN71 531 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 SIGLEC5O15389 551 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 CD33P20138 364 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 CX3CR1P49238 355 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 CAV3P56539 151 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 AANATQ16613 207 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 KLHL12Q53G59 568 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 LIAT1Q6ZQX7 453 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 FAM185AQ8N0U4 392 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 FAM86B1Q8N7N1 296 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 PIFOQ8TCI5 191 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 OR5M11Q96RB7 305 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 MICU1Q9BPX6 476 aa16.09■□□□□ 0.17
CCDC40-206ENST00000572083 IDH3BO43837 385 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 ACAA1P09110 424 aaPredicted RBP16.08■□□□□ 0.16
CCDC40-206ENST00000572083 GABRA2P47869 451 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 GSK3AP49840 483 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 KRT72Q14CN4 511 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 PLA1AQ53H76 456 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 MKXQ8IYA7 352 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 TMEM185AQ8NFB2 350 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 OR10Z1Q8NGY1 313 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 SGK3Q96BR1 496 aa16.08■□□□□ 0.16
CCDC40-206ENST00000572083 ENTPD1P49961 510 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 SPIBQ01892 262 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 CCBE1Q6UXH8 406 aaPredicted RBP16.07■□□□□ 0.16
CCDC40-206ENST00000572083 FAM57BQ71RH2 274 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 ZNRF1Q8ND25 227 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 OR2T4Q8NH00 348 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 WIPF2Q8TF74 440 aaPredicted RBP16.07■□□□□ 0.16
CCDC40-206ENST00000572083 KCTD14Q9BQ13 255 aaPredicted RBP16.07■□□□□ 0.16
CCDC40-206ENST00000572083 RTL8AQ9BWD3 113 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 EGLN3Q9H6Z9 239 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 DNAJC27Q9NZQ0 273 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 NLKQ9UBE8 527 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 V9GYQ6 96 aa16.07■□□□□ 0.16
CCDC40-206ENST00000572083 A0A1W2PRX2 142 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 ANXA2P2A6NMY6 339 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 OR2AT4A6NND4 320 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 GADD45GO95257 159 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 GYPBP06028 91 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 HSD11B1P28845 292 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 IL5RAQ01344 420 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 KCTD8Q6ZWB6 473 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 Q8N2B8 174 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 DTX3Q8N9I9 347 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 ZNF511Q8NB15 262 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 DDOQ99489 341 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 FGF23Q9GZV9 251 aaPredicted RBP16.06■□□□□ 0.16
CCDC40-206ENST00000572083 C19orf12Q9NSK7 152 aa16.06■□□□□ 0.16
CCDC40-206ENST00000572083 IGKV1D-17A0A075B6S4 117 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 TRBV23-1A0A0A0MS06 115 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 DHRS12A0PJE2 317 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 ZNF850A8MQ14 1090 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 ZNF593O00488 134 aaPredicted RBP16.05■□□□□ 0.16
CCDC40-206ENST00000572083 PEX14O75381 377 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 COX7A1P24310 79 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 RAB13P51153 203 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 GRB2P62993 217 aaKnown RBP16.05■□□□□ 0.16
CCDC40-206ENST00000572083 PRDX4Q13162 271 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 DEFB121Q5J5C9 76 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 CGB2Q6NT52 195 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 CPLX4Q7Z7G2 160 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 LHFPL4Q7Z7J7 247 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 TMEM219Q86XT9 240 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 CSNK2A3Q8NEV1 391 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 CDCA4Q9BXL8 241 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 BRD7Q9NPI1 651 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 ZNF319Q9P2F9 582 aa16.05■□□□□ 0.16
CCDC40-206ENST00000572083 TMEM210A6NLX4 147 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 HMGB1P1B2RPK0 211 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-206ENST00000572083 GLRA1P23415 457 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 FMO3P31513 532 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 SLC15A1P46059 708 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 GSSP48637 474 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 CAPZA1P52907 286 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 LGALS4P56470 323 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 ZNF121P58317 390 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-206ENST00000572083 TMEM95Q3KNT9 176 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 ARSJQ5FYB0 599 aaPredicted RBP16.04■□□□□ 0.16
CCDC40-206ENST00000572083 DYNAPQ8N1N2 210 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 SLC37A3Q8NCC5 494 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 FGFR1OP2Q9NVK5 253 aa16.04■□□□□ 0.16
CCDC40-206ENST00000572083 SAMD4AQ9UPU9 718 aaKnown RBP16.04■□□□□ 0.16
CCDC40-206ENST00000572083 WI2-2373I1.2A0A1W2PRP0 233 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 RHBDL1O75783 438 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 PSG2P11465 335 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 CFL1P23528 166 aaKnown RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 ACKR3P25106 362 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 MSX2P35548 267 aaPredicted RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 ERVFRD-1P60508 538 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms