RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 FAM90A1Q86YD7 464 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 PAPD5Q8NDF8 572 aaKnown RBP7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 TBC1D15Q8TC07 691 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 DNAJC9Q8WXX5 260 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 LHX4Q969G2 390 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 DACT3Q96B18 629 aaPredicted RBP7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 TMIGD2Q96BF3 282 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 RNF170Q96K19 258 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 C1orf147Q96MC9 270 aaPredicted RBP7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 AMELYQ99218 206 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 CCL13Q99616 98 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 VCX3BQ9H321 246 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 CNTD2Q9H8S5 307 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 SMURF1Q9HCE7 757 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 ACOXLQ9NUZ1 547 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 TVP23BQ9NYZ1 205 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 NDUFA13Q9P0J0 144 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 ONECUT1Q9UBC0 465 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 DNAJB9Q9UBS3 223 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 CAB39Q9Y376 341 aaPredicted RBP7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 FAM96BQ9Y3D0 163 aa7.41□□□□□ -1.22
NPLOC4-204ENST00000570324 SVEP1Q4LDE5 3571 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 CENPVL3A0A0U1RRI6 287 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 FAM181BA6NEQ2 426 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 NKX6-3A6NJ46 265 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 TMEM210A6NLX4 147 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 SRRM5B3KS81 715 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 ACOT8O14734 319 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 GPR37O15354 613 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 MAP2K3P46734 347 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 CSNK2BP67870 215 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 CDK5Q00535 292 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 IKZF1Q13422 519 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 APOFQ13790 326 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 TUSC1Q2TAM9 212 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 LRRC10Q5BKY1 277 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 WDR38Q5JTN6 314 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 TMEM236Q5W0B7 351 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 FIP1L1Q6UN15 594 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 C17orf107Q6ZR85 190 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 THAP5Q7Z6K1 395 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 TMEM179BQ7Z7N9 219 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 ZDHHC23Q8IYP9 409 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 GALNT4Q8N4A0 578 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 OR5T2Q8NGG2 359 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 OR4F5Q8NH21 305 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 H1FXQ92522 213 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 TBX15Q96SF7 602 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 MROQ9BYG7 248 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 PRRG3Q9BZD7 231 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 BEX1Q9HBH7 125 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 SNTG1Q9NSN8 517 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 HAO2Q9NYQ3 351 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 H2AFY2Q9P0M6 372 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 ZNF319Q9P2F9 582 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 KAAG1Q9UBP8 84 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 RPUSD1Q9UJJ7 312 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 ZNF391Q9UJN7 358 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 TMEM14AQ9Y6G1 99 aa7.4□□□□□ -1.22
NPLOC4-204ENST00000570324 IGHV1-69DA0A0B4J2H0 117 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 ZNF816-ZNF321PA0A0X1KG74 233 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 A0A1B0GUS0 222 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 A0A1B0GVI7 797 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 TMEM269A0A1B0GVZ9 245 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 TNFRSF13BO14836 293 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 CST4P01036 141 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 KNG1P01042 644 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 IGHV1-69P01742 117 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 MRPL3P09001 348 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 MDKP21741 143 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 GLRA1P23415 457 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 EEF1B2P24534 225 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 CRISP1P54107 249 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 ACTR3P61158 418 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 CDONQ4KMG0 1287 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 Q6YL49 198 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 PRSS45Q7RTY3 260 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 WDR86Q86TI4 376 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 C11orf53Q8IXP5 236 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 PDZD9Q8IXQ8 264 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 HS3ST5Q8IZT8 346 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 TMEM86BQ8N661 226 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 OR10Z1Q8NGY1 313 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 SSMEM1Q8WWF3 244 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 OR5P3Q8WZ94 311 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 RPL3LQ92901 407 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 STMN2Q93045 179 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 C12orf43Q96C57 262 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 ITPKCQ96DU7 683 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 MED30Q96HR3 178 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 PKP2Q99959 881 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 YIPF3Q9GZM5 350 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 SIRPDQ9H106 197 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 PPP1R3EQ9H7J1 279 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 SLC25A19Q9HC21 320 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 PAPOLBQ9NRJ5 636 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 SCOCQ9UIL1 159 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 IKZF2Q9UKS7 526 aa7.39□□□□□ -1.23
NPLOC4-204ENST00000570324 GTF2A1LQ9UNN4 478 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms