RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PAPOLGQ9BWT3 736 aaKnown RBP12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 IL20Q9NYY1 176 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 N6AMT1Q9Y5N5 214 aa12.85□□□□□ -0.35
HERPUD1-215ENST00000568676 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 SIGLEC5O15389 551 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 PLXNB1O43157 2135 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 SEMG1P04279 462 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 PAICSP22234 425 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 GSK3AP49840 483 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 HSP90B2PQ58FF3 399 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 ANGPTL6Q8NI99 470 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 CDCA4Q9BXL8 241 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 OR10A2Q9H208 303 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 ZNF391Q9UJN7 358 aa12.84□□□□□ -0.35
HERPUD1-215ENST00000568676 A0A1W2PPH5 198 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 DHRS12A0PJE2 317 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 H0YAE9 185 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 KRT36O76013 467 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 FABP3P05413 133 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 ACAA1P09110 424 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 NDUFB7P17568 137 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 POU1F1P28069 291 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 SLC25A1P53007 311 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 PSME3P61289 254 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 MXRA7P84157 204 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 DGUOKQ16854 277 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 FAM76BQ5HYJ3 339 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 CRIP3Q6Q6R5 217 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 SLC37A3Q8NCC5 494 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 OR4F17Q8NGA8 305 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 OR5T2Q8NGG2 359 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 ITFG2Q969R8 447 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 CMTM5Q96DZ9 223 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 SEH1LQ96EE3 360 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 DUS3LQ96G46 650 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 GAFA1Q96PS6 74 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 OR4F4Q96R69 305 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 MAGEL2Q9UJ55 1249 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 FOXJ3Q9UPW0 622 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 BAIAP2Q9UQB8 552 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 SIGLEC9Q9Y336 463 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 RHBDD3Q9Y3P4 386 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 LRP12Q9Y561 859 aa12.83□□□□□ -0.36
HERPUD1-215ENST00000568676 GLCEO94923 617 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 PSKH1P11801 424 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 RRM2P31350 389 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 SF3A3Q12874 501 aaKnown RBP eCLIP12.82□□□□□ -0.362e-8■■□□□ 12.5
HERPUD1-215ENST00000568676 LYPD4Q6UWN0 246 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 PRSS45Q7RTY3 260 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 NDUFA11Q86Y39 141 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 PNKDQ8N490 385 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 OR51L1Q8NGJ5 315 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 RNF133Q8WVZ7 376 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 ZNRF4Q8WWF5 429 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 SGCDQ92629 289 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 NMNAT2Q9BZQ4 307 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 WDR13Q9H1Z4 485 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 EGLN3Q9H6Z9 239 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 HEXA-AS1Q9H8Q6 139 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 IL1RAPQ9NPH3 570 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 NLKQ9UBE8 527 aa12.82□□□□□ -0.36
HERPUD1-215ENST00000568676 hCG_1809904A0A1W2PP81 198 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 A0A1W2PPE2 198 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 A0A1W2PR64 198 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 A0A1W2PRV1 198 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 OR2AT4A6NND4 320 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 ATP8B1O43520 1251 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 ANGPTL7O43827 346 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 FBXO24O75426 580 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 CST4P01036 141 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 PRB2P02812 416 aaPredicted RBP12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 SELLP14151 372 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 SPI1P17947 270 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 HMGA2P52926 109 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 DLX1P56177 255 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 ZNF121P58317 390 aaPredicted RBP12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 PRB3Q04118 309 aaPredicted RBP12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 EIF2B1Q14232 305 aaKnown RBP12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 LY6EQ16553 131 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 KLHL12Q53G59 568 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 RASSF6Q6ZTQ3 369 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 FAM57BQ71RH2 274 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 SHFQ7M4L6 423 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 C11orf44Q8N8P7 122 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 OR5K1Q8NHB7 308 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 OR5P3Q8WZ94 311 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 SNTG1Q9NSN8 517 aa12.81□□□□□ -0.36
HERPUD1-215ENST00000568676 AKR7A2O43488 359 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 IFNGP01579 166 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 VSIG10L2P0DP72 767 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 FAHP16930 419 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 GLRA1P23415 457 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 PRDX4Q13162 271 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 CRMP1Q14194 572 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 OXLD1Q5BKU9 147 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 HCP5Q6MZN7 132 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms