RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 OR11G2Q8NGC1 345 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 BADQ92934 168 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF799Q96GE5 643 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 MMP25Q9NPA2 562 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 PSENENQ9NZ42 101 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 MTCH1Q9NZJ7 389 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 MBD1Q9UIS9 605 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 PHIPQ8WWQ0 1821 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 KCNAB3O43448 404 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 CLN5O75503 358 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 VSIG10L2P0DP72 767 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF25P17030 456 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 AGFG1P52594 562 aaKnown RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 TPPP2P59282 170 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 UBE2G2P60604 165 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF296Q8WUU4 475 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 RDH5Q92781 318 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 C8orf33Q9H7E9 229 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 MRM2Q9UI43 246 aaKnown RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 TRAPPC1Q9Y5R8 145 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 TRBV23-1A0A0A0MS06 115 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 FAM24AA6NFZ4 105 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 ST6GAL1P15907 406 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 HIST1H1DP16402 221 aaKnown RBP11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 APOBEC1P41238 236 aaKnown RBP11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 WDR34Q96EX3 536 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC35D1Q9NTN3 355 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 MCTS1Q9ULC4 181 aaKnown RBP11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 CKAP5Q14008 2032 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 COL11A2P13942 1736 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 TRAV34A0A0B4J273 112 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 FAHP16930 419 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 METAP1P53582 386 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 MRPS18AQ9NVS2 196 aaKnown RBP11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 SPTBP11277 2137 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR5K3A6NET4 321 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZIC2O95409 532 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 CTXN2P0C2S0 81 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC25A4P12235 298 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 THEM4Q5T1C6 240 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 KLHDC1Q8N7A1 406 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR10P1Q8NGE3 313 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR5C1Q8NGR4 320 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 PIK3IP1Q96FE7 263 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 CTDSP1Q9GZU7 261 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 TNFSF18Q9UNG2 199 aa11.13□□□□□ -0.63
CSPG4P13-202ENST00000567704 NXPH2O95156 264 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 COX5AP20674 150 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 GCH1P30793 250 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 HLA-DRB3P79483 266 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 BAHD1Q8TBE0 780 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 ATOH1Q92858 354 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 IL22RA2Q969J5 263 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 NRIP2Q9BQI9 281 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR51B4Q9Y5P0 310 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 ARL2-SNX15V9GYD0 113 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 ANKRD31Q8N7Z5 1873 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 RBFOX3A6NFN3 312 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR8U8P0C7N1 319 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 GABRA2P47869 451 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 TCTN1Q2MV58 587 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 ACOT6Q3I5F7 207 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 TRIM61Q5EBN2 209 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 CLEC18BQ6UXF7 455 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 H2BFWTQ7Z2G1 175 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 CLCF1Q9UBD9 225 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 ST3GAL6Q9Y274 331 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 LIPGQ9Y5X9 500 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 SEC16AO15027 2179 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 TRAV8-7A0A075B6U6 113 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 MFNGO00587 321 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 EIF1BO60739 113 aaKnown RBP11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 NKAIN2Q5VXU1 208 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 C11orf40Q8WZ69 217 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 MRPS24Q96EL2 167 aaKnown RBP11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 GPR87Q9BY21 358 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 NEU3Q9UQ49 428 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 CCDC88CQ9P219 2028 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 PLSCR5A0PG75 271 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 IRF2P14316 349 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 GALR1P47211 349 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 PPP1CBP62140 327 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 CNTD2Q9H8S5 307 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 FGF21Q9NSA1 209 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 FRRS1LQ9P0K9 344 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 MYOTQ9UBF9 498 aa11.12□□□□□ -0.63
CSPG4P13-202ENST00000567704 LINC01553A4QN01 128 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 CD160O95971 181 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 TCN2P20062 427 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 DRD1P21728 446 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 NHLRC3Q5JS37 347 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 ABHD17BQ5VST6 288 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 SYT13Q7L8C5 426 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 MAML2Q8IZL2 1156 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR10AC1Q8NH08 325 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 PRAMEF25A6NGN4 478 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms