RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SONP18583 2426 aaKnown RBP11.44□□□□□ -0.58
CLK3-218ENST00000566926 GABRPO00591 440 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 TPD52L2O43399 206 aaKnown RBP11.44□□□□□ -0.58
CLK3-218ENST00000566926 TIMM8AO60220 97 aaPredicted RBP11.44□□□□□ -0.58
CLK3-218ENST00000566926 IL1AP01583 271 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 HPXP02790 462 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 ZNF12P17014 697 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 MYL9P24844 172 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 SOX6P35712 828 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 MPV17P39210 176 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 GZMKP49863 264 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 TPTEP56180 551 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 TMEM33P57088 247 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 NANOS3P60323 173 aaKnown RBP11.44□□□□□ -0.58
CLK3-218ENST00000566926 VBP1P61758 197 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 NCS1P62166 190 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 FABP5Q01469 135 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 DGUOKQ16854 277 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 Q499Y3 187 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 WDR38Q5JTN6 314 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 OTPQ5XKR4 325 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 CYB5R2Q6BCY4 276 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 LINC00299Q6ZSB3 139 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 SPATC1Q76KD6 591 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 PRSS35Q8N3Z0 413 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 OR52H1Q8NGJ2 320 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 RPL3LQ92901 407 aaKnown RBP11.44□□□□□ -0.58
CLK3-218ENST00000566926 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
CLK3-218ENST00000566926 APOBEC3DQ96AK3 386 aaPredicted RBP11.44□□□□□ -0.58
CLK3-218ENST00000566926 CENPOQ9BU64 300 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 BPESC1Q9GZL8 116 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 EGLN1Q9GZT9 426 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 CCDC59Q9P031 241 aaKnown RBP11.44□□□□□ -0.58
CLK3-218ENST00000566926 STARD10Q9Y365 291 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 TANC2Q9HCD6 1990 aa11.44□□□□□ -0.58
CLK3-218ENST00000566926 FN1P02751 2386 aaKnown RBP11.43□□□□□ -0.58
CLK3-218ENST00000566926 M0R135 149 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 TMEM127O75204 238 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 CD2P06729 351 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 ADH4P08319 380 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 RAC2P15153 192 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 CX3CR1P49238 355 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 MTNR1BP49286 362 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 MMP15P51511 669 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 CCL8P80075 99 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 RIN1Q13671 783 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 KRTAP27-1Q3LI81 207 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 ACSM3Q53FZ2 586 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 C22orf42Q6IC83 251 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 TPRA1Q86W33 373 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 CROCCP3Q8IVE0 287 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 ELMOD2Q8IZ81 293 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 ZNF283Q8N7M2 679 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 SLC7A6Q92536 515 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 ZNF799Q96GE5 643 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 PDCD1LG2Q9BQ51 273 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 RGCCQ9H4X1 137 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 SAP30LQ9HAJ7 183 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 G6PC2Q9NQR9 355 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 HHLA2Q9UM44 414 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 A3GALT2U3KPV4 340 aa11.43□□□□□ -0.58
CLK3-218ENST00000566926 TRAV1-2A0A0B4J238 106 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 TRBV5-5A0A0J9YX44 114 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 A0A0U1RQV5 110 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 PNPP00491 289 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 DBHP09172 617 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 UCHL1P09936 223 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 OCM2P0CE71 109 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 KITLGP21583 273 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 TNFSF4P23510 183 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 CFL1P23528 166 aaKnown RBP11.42□□□□□ -0.58
CLK3-218ENST00000566926 MAGEB1P43366 347 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 GPR6P46095 362 aaPredicted RBP11.42□□□□□ -0.58
CLK3-218ENST00000566926 ZNF121P58317 390 aaPredicted RBP11.42□□□□□ -0.58
CLK3-218ENST00000566926 RPS11P62280 158 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLK3-218ENST00000566926 LSM3P62310 102 aaKnown RBP11.42□□□□□ -0.58
CLK3-218ENST00000566926 MFGE8Q08431 387 aaPredicted RBP11.42□□□□□ -0.58
CLK3-218ENST00000566926 PSG7Q13046 419 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 SPCS2Q15005 226 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 FBXW12Q6X9E4 464 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 TMEM91Q6ZNR0 172 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 CEACAM19Q7Z692 300 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 NDNFQ8TB73 568 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 HAVCR1Q96D42 359 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 ELMOD3Q96FG2 381 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 C1QTNF5Q9BXJ0 243 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 PBOV1Q9GZY1 135 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 SLITRK2Q9H156 845 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 OR10A2Q9H208 303 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 CKLFQ9UBR5 152 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 PURGQ9UJV8 347 aaKnown RBP11.42□□□□□ -0.58
CLK3-218ENST00000566926 GTF2A1LQ9UNN4 478 aa11.42□□□□□ -0.58
CLK3-218ENST00000566926 IGHV4-61A0A0C4DH41 118 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 IGHV1-69-2A0A0G2JMI3 117 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 A8MV72 311 aaPredicted RBP11.41□□□□□ -0.58
CLK3-218ENST00000566926 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 F5H5K5 113 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms