RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 AKR7A2O43488 359 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 CST4P01036 141 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 MELTFP08582 738 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 MMP9P14780 707 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 HOXB6P17509 224 aaKnown RBP5.3□□□□□ -1.56
TCF4-228ENST00000565393 NDUFB7P17568 137 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 ALOX5APP20292 161 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 EEF1B2P24534 225 aaKnown RBP5.3□□□□□ -1.56
TCF4-228ENST00000565393 MAP2K3P46734 347 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 GABRA2P47869 451 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 GPM6AP51674 278 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 CDK5Q00535 292 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 PRB3Q04118 309 aaPredicted RBP5.3□□□□□ -1.56
TCF4-228ENST00000565393 APOFQ13790 326 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 FLOT2Q14254 428 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 C11orf91Q3C1V1 193 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 CDONQ4KMG0 1287 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 SLC35D3Q5M8T2 416 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 PRR31Q5SQ13 230 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 KCTD18Q6PI47 426 aaPredicted RBP5.3□□□□□ -1.56
TCF4-228ENST00000565393 PRSS45Q7RTY3 260 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 VMO1Q7Z5L0 202 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 THAP5Q7Z6K1 395 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 WDR86Q86TI4 376 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 FGFRL1Q8N441 504 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 FAM216BQ8N7L0 139 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 PAPD5Q8NDF8 572 aaKnown RBP5.3□□□□□ -1.56
TCF4-228ENST00000565393 BBS1Q8NFJ9 593 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 OR4F5Q8NH21 305 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 ZNF671Q8TAW3 534 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 SSMEM1Q8WWF3 244 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 TEAD3Q99594 435 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 PKP2Q99959 881 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 MROQ9BYG7 248 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 SIRPDQ9H106 197 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 SLITRK2Q9H156 845 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 DPAGT1Q9H3H5 408 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 PRDM13Q9H4Q3 707 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 ZNF696Q9H7X3 374 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 NIPAL2Q9H841 368 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 DNAJB9Q9UBS3 223 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 RPUSD1Q9UJJ7 312 aaKnown RBP5.3□□□□□ -1.56
TCF4-228ENST00000565393 GTF2A1LQ9UNN4 478 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 MALRD1Q5VYJ5 2156 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 A0A1B0GUS0 222 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 A0A1B0GVI7 797 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 A0A1B0GW55 424 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 A0A1W2PQ09 198 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 BTBD17A6NE02 478 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 NKX6-3A6NJ46 265 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ACOD1A6NK06 481 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 TMEM210A6NLX4 147 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 PRODHO43272 600 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 FKBP6O75344 327 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 PAHP00439 452 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 TFF1P04155 84 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 MRPL3P09001 348 aaKnown RBP5.29□□□□□ -1.56
TCF4-228ENST00000565393 DUX4L2P0CJ85 424 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DUX4L3P0CJ86 424 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DUX4L4P0CJ87 422 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DUX4L5P0CJ88 424 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DUX4L6P0CJ89 424 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DUX4L7P0CJ90 424 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 GLRA1P23415 457 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ACKR3P25106 362 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 IER3P46695 156 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 TGM4P49221 684 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 CAPZA1P52907 286 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 CRISP1P54107 249 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 RAG2P55895 527 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ACTR3P61158 418 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 SRSF4Q08170 494 aaKnown RBP5.29□□□□□ -1.56
TCF4-228ENST00000565393 BLMHQ13867 455 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DNAL1Q4LDG9 190 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DMRTC1Q5HYR2 192 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 CEP78Q5JTW2 689 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ATPAF1Q5TC12 328 aaPredicted RBP5.29□□□□□ -1.56
TCF4-228ENST00000565393 DUX4L9Q6RFH8 374 aaPredicted RBP5.29□□□□□ -1.56
TCF4-228ENST00000565393 TREML4Q6UXN2 200 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 TRPM8Q7Z2W7 1104 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ZDHHC23Q8IYP9 409 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 TMEM86BQ8N661 226 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 LY6G5BQ8NDX9 201 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 OR8B12Q8NGG6 310 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 OR5A2Q8NGI9 324 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 BCAS4Q8TDM0 211 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ASB17Q8WXJ9 295 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DYRK2Q92630 601 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 PPP1R14AQ96A00 147 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 C12orf43Q96C57 262 aaKnown RBP5.29□□□□□ -1.56
TCF4-228ENST00000565393 ITPKCQ96DU7 683 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 LYZL4Q96KX0 146 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DCTN5Q9BTE1 182 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 YIPF3Q9GZM5 350 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 PBOV1Q9GZY1 135 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 WDR13Q9H1Z4 485 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ABCB9Q9NP78 766 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 SIRT7Q9NRC8 400 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 PAPOLBQ9NRJ5 636 aaKnown RBP5.29□□□□□ -1.56
TCF4-228ENST00000565393 C1RLQ9NZP8 487 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms