RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 IL5RAQ01344 420 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 PTGES3Q15185 160 aaKnown RBP8.29□□□□□ -1.08
CMTM3-209ENST00000565003 SNAPC1Q16533 368 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 MICBQ29980 383 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 METTL11BQ5VVY1 283 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 BCDIN3DQ7Z5W3 292 aaKnown RBP8.29□□□□□ -1.08
CMTM3-209ENST00000565003 FTMTQ8N4E7 242 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 FAM216BQ8N7L0 139 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 PNLDC1Q8NA58 520 aaKnown RBP8.29□□□□□ -1.08
CMTM3-209ENST00000565003 DNAJC9Q8WXX5 260 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 RPL3LQ92901 407 aaKnown RBP8.29□□□□□ -1.08
CMTM3-209ENST00000565003 NRBF2Q96F24 287 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 TEAD3Q99594 435 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 MICU1Q9BPX6 476 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 ZNF747Q9BV97 191 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 RTL8AQ9BWD3 113 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 TEX12Q9BXU0 123 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 TTTY10Q9BZA0 68 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 YIPF3Q9GZM5 350 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 WDR13Q9H1Z4 485 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 NIPAL2Q9H841 368 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 FAM206AQ9NX38 181 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 RPUSD1Q9UJJ7 312 aaKnown RBP8.29□□□□□ -1.08
CMTM3-209ENST00000565003 COPS3Q9UNS2 423 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 MPC1Q9Y5U8 109 aa8.29□□□□□ -1.08
CMTM3-209ENST00000565003 TMEM210A6NLX4 147 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 P2RY10O00398 339 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 MITFO75030 526 aaPredicted RBP8.28□□□□□ -1.08
CMTM3-209ENST00000565003 ECDO95905 644 aaPredicted RBP8.28□□□□□ -1.08
CMTM3-209ENST00000565003 TFF1P04155 84 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 SELLP14151 372 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 EPHA2P29317 976 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 ARF6P62330 175 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 BNIP1Q12981 228 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 SNCBQ16143 134 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 FAM76BQ5HYJ3 339 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 DMRTC1Q5HYR2 192 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 LCN1P1Q5VSP4 162 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 STUMQ69YW2 141 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 C16orf87Q6PH81 154 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 KCTD8Q6ZWB6 473 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 KRT77Q7Z794 578 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 SCCPDHQ8NBX0 429 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 OR5T2Q8NGG2 359 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 PIGCQ92535 297 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 ZDHHC16Q969W1 377 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 C12orf43Q96C57 262 aaKnown RBP8.28□□□□□ -1.08
CMTM3-209ENST00000565003 RNF170Q96K19 258 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 OR8B4Q96RC9 309 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 TNFRSF19Q9NS68 423 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 SNTG1Q9NSN8 517 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 ZNF391Q9UJN7 358 aa8.28□□□□□ -1.08
CMTM3-209ENST00000565003 IGHV1-69DA0A0B4J2H0 117 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 A0A0U1RQV5 110 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 TMEM269A0A1B0GVZ9 245 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 AKR7A2O43488 359 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 SPRY1O43609 319 aaPredicted RBP8.27□□□□□ -1.09
CMTM3-209ENST00000565003 RHBDL1O75783 438 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 IGHV1-69P01742 117 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 MELTFP08582 738 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 OMGP23515 440 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 DCTDP32321 178 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 GPM6AP51674 278 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 BPIFB3P59826 476 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 IL13RA1P78552 427 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 ROM1Q03395 351 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 MFGE8Q08431 387 aaPredicted RBP8.27□□□□□ -1.09
CMTM3-209ENST00000565003 IKZF1Q13422 519 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 PDCD1Q15116 288 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 ATP6AP1Q15904 470 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 C11orf91Q3C1V1 193 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 CDONQ4KMG0 1287 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 ATPAF1Q5TC12 328 aaPredicted RBP8.27□□□□□ -1.09
CMTM3-209ENST00000565003 KCTD18Q6PI47 426 aaPredicted RBP8.27□□□□□ -1.09
CMTM3-209ENST00000565003 DEGS2Q6QHC5 323 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 SHISA2Q6UWI4 295 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 Q6YL49 198 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 KRT74Q7RTS7 529 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 SLC36A1Q7Z2H8 476 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 VMO1Q7Z5L0 202 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 PDZD9Q8IXQ8 264 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 ZDHHC23Q8IYP9 409 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 LY6G5BQ8NDX9 201 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 OR10Z1Q8NGY1 313 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 OR5K1Q8NHB7 308 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 SGMS2Q8NHU3 365 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 FAM81AQ8TBF8 368 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 GATAD2BQ8WXI9 593 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 LHX4Q969G2 390 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 PPP1R14AQ96A00 147 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 RAB3IPQ96QF0 476 aaPredicted RBP8.27□□□□□ -1.09
CMTM3-209ENST00000565003 CNN2Q99439 309 aaKnown RBP8.27□□□□□ -1.09
CMTM3-209ENST00000565003 MROQ9BYG7 248 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 CHIAQ9BZP6 476 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 PBOV1Q9GZY1 135 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 CNTD2Q9H8S5 307 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 UNKLQ9H9P5 680 aaKnown RBP8.27□□□□□ -1.09
CMTM3-209ENST00000565003 ABCB9Q9NP78 766 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 NOX4Q9NPH5 578 aa8.27□□□□□ -1.09
CMTM3-209ENST00000565003 KRT84Q9NSB2 600 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms