RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 RTL8AQ9BWD3 113 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 PLK3Q9H4B4 646 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 METTL17Q9H7H0 456 aaPredicted RBP10.99□□□□□ -0.65
CLK3-214ENST00000564096 NKIRAS2Q9NYR9 191 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 DUSP13Q9UII6 198 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 AK6Q9Y3D8 172 aaKnown RBP10.99□□□□□ -0.65
CLK3-214ENST00000564096 RHBDD3Q9Y3P4 386 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 IGLV3-9A0A075B6K5 115 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 SHISA3A0PJX4 238 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 OR5B21A6NL26 309 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 ZNF850A8MQ14 1090 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 SHISA9B4DS77 424 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 C19orf84I3L1E1 186 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 GMDSO60547 372 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 IGHV3-13P01766 116 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 ALDOBP05062 364 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 CFPP27918 469 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 ZNF93P35789 620 aaPredicted RBP10.98□□□□□ -0.65
CLK3-214ENST00000564096 FUT6P51993 359 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 RAB11BQ15907 218 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 NKPD1Q17RQ9 610 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 ZNF404Q494X3 552 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 ASPHD2Q6ICH7 369 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 MOB3CQ70IA8 216 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 SPERTQ8NA61 448 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 OR51A2Q8NGJ7 313 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 ACOT12Q8WYK0 555 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 GPER1Q99527 375 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 SPOCK3Q9BQ16 436 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 SYT3Q9BQG1 590 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 TMEM100Q9NV29 134 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 FAIMQ9NVQ4 179 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 FBXO9Q9UK97 447 aaPredicted RBP10.98□□□□□ -0.65
CLK3-214ENST00000564096 FZR1Q9UM11 496 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 A3GALT2U3KPV4 340 aa10.98□□□□□ -0.65
CLK3-214ENST00000564096 SMIM30A4D0T7 59 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 IFITM5A6NNB3 132 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 NCR1O76036 304 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 OR4A8P0C604 315 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 CLEC2LP0C7M8 214 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 PRF1P14222 555 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 ADRA2CP18825 462 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 EVX1P49640 407 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 RBP2P50120 134 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 ATP1B3P54709 279 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 OR10A3P58181 314 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 DYNC1I2Q13409 638 aaKnown RBP10.97□□□□□ -0.65
CLK3-214ENST00000564096 OR8G1Q15617 311 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 UBE2V2Q15819 145 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 CEACAM21Q3KPI0 293 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 ZNF672Q499Z4 452 aaPredicted RBP10.97□□□□□ -0.65
CLK3-214ENST00000564096 IDNKQ5T6J7 187 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 MZT2AQ6P582 158 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 OR52N4Q8NGI2 321 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 OR13G1Q8NGZ3 307 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 MCFD2Q8NI22 146 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 ZNF671Q8TAW3 534 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 TRMT10AQ8TBZ6 339 aaKnown RBP10.97□□□□□ -0.65
CLK3-214ENST00000564096 NPRL2Q8WTW4 380 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 DHRS9Q9BPW9 319 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 TMEM204Q9BSN7 226 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 MRPL37Q9BZE1 423 aaKnown RBP10.97□□□□□ -0.65
CLK3-214ENST00000564096 C14orf119Q9NWQ9 140 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 DAPK2Q9UIK4 370 aa10.97□□□□□ -0.65
CLK3-214ENST00000564096 DIDO1Q9BTC0 2240 aaKnown RBP10.96□□□□□ -0.65
CLK3-214ENST00000564096 IGKV1-9A0A0C4DH69 117 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 A0A0G2JK05 382 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 FAM230AA0A1W2PPH8 454 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 TMEM210A6NLX4 147 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 SLC17A2O00624 439 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 RNF224P0DH78 156 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 CA6P23280 308 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 TNFSF4P23510 183 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 HTR2CP28335 458 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 APOBEC3AP31941 199 aaPredicted RBP10.96□□□□□ -0.65
CLK3-214ENST00000564096 SERPINF1P36955 418 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 MTCP1P56278 107 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 SCAND1P57086 179 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 SNRPD2P62316 118 aaKnown RBP10.96□□□□□ -0.65
CLK3-214ENST00000564096 GNG3P63215 75 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 RIN1Q13671 783 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 DAZAP2Q15038 168 aaPredicted RBP10.96□□□□□ -0.65
CLK3-214ENST00000564096 ADIPOQQ15848 244 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 AWAT2Q6E213 333 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 FBXL14Q8N1E6 418 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 OR5A2Q8NGI9 324 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 HPSE2Q8WWQ2 592 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 FBXW5Q969U6 566 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 ITPKCQ96DU7 683 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 DIRC2Q96SL1 478 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 S100A13Q99584 98 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 SLC30A2Q9BRI3 323 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 SLIRPQ9GZT3 109 aaKnown RBP10.96□□□□□ -0.65
CLK3-214ENST00000564096 C6orf62Q9GZU0 229 aaPredicted RBP10.96□□□□□ -0.65
CLK3-214ENST00000564096 DYNLRB1Q9NP97 96 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 CISD1Q9NZ45 108 aaKnown RBP10.96□□□□□ -0.65
CLK3-214ENST00000564096 ABRACLQ9P1F3 81 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 TAAR3PQ9P1P4 343 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 STEAP1Q9UHE8 339 aa10.96□□□□□ -0.65
CLK3-214ENST00000564096 ADAM30Q9UKF2 790 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms