RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ATG5Q9H1Y0 275 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 OR51B6Q9H340 312 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 SH3BGRL2Q9UJC5 107 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 MRPS28Q9Y2Q9 187 aaKnown RBP15.58■□□□□ 0.08
COMMD4-208ENST00000563220 DSPP15924 2871 aaKnown RBP15.58■□□□□ 0.08
COMMD4-208ENST00000563220 CCNKO75909 580 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 BPNT1O95861 308 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 NRASP01111 189 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 HOXC12P31275 282 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 MNDAP41218 407 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 MALLQ13021 153 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 CARTPTQ16568 116 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 RFPL4BQ6ZWI9 263 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 OR6F1Q8NGZ6 308 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 UBASH3BQ8TF42 649 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 PTX4Q96A99 478 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 RABL2AQ9UBK7 228 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-208ENST00000563220 RABL2BQ9UNT1 228 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 A0A0G2JNJ9 132 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 GGT3PA6NGU5 568 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 GSTZ1O43708 216 aaPredicted RBP15.57■□□□□ 0.08
COMMD4-208ENST00000563220 IGKV3-15P01624 115 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 C1QL2Q7Z5L3 287 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 C17orf78Q8N4C9 275 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 OR56B2PQ8NGI1 322 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 OR5D18Q8NGL1 313 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 AUNIPQ9H7T9 357 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 DIABLOQ9NR28 239 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 CRIM1Q9NZV1 1036 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 Q9UFV3 132 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 RAB22AQ9UL26 194 aa15.57■□□□□ 0.08
COMMD4-208ENST00000563220 ZNF816-ZNF321PA0A0X1KG74 233 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 OR5H1A6NKK0 313 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 TMEM14DPA8MWL7 114 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 RAB6AP20340 208 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 CAPZA1P52907 286 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 MRPL21Q7Z2W9 205 aaKnown RBP15.56■□□□□ 0.08
COMMD4-208ENST00000563220 SMIM4Q8WVI0 70 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 PIGCQ92535 297 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 FAM46BQ96A09 425 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 WBP1Q96G27 269 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 POU2F3Q9UKI9 436 aa15.56■□□□□ 0.08
COMMD4-208ENST00000563220 RP1L1Q8IWN7 2480 aaPredicted RBP15.56■□□□□ 0.08
COMMD4-208ENST00000563220 ZGRF1Q86YA3 2104 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 IGKV1-27A0A075B6S5 117 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 A8MXE2 369 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 BMP5P22003 454 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 PTGFRP43088 359 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 SRP9P49458 86 aaKnown RBP15.55■□□□□ 0.08
COMMD4-208ENST00000563220 ZNF57Q68EA5 555 aaPredicted RBP15.55■□□□□ 0.08
COMMD4-208ENST00000563220 MOB3CQ70IA8 216 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 OR52I2Q8NH67 350 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 SPSB1Q96BD6 273 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 CDH20Q9HBT6 801 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 FBLN5Q9UBX5 448 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 ZNF221Q9UK13 617 aa15.55■□□□□ 0.08
COMMD4-208ENST00000563220 TRAV18A0A075B6X5 111 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 FAM230AA0A1W2PPH8 454 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 HMX3A6NHT5 357 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 MSTNO14793 375 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 TPPPO94811 219 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 NAT2P11245 290 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 IL32P24001 234 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 OPRM1P35372 400 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 INPP1P49441 399 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 MTCP1P56278 107 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 RBPJQ06330 500 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 MOGAT2Q3SYC2 334 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 ZBTB37Q5TC79 503 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 RSBN1Q5VWQ0 802 aaPredicted RBP15.54■□□□□ 0.08
COMMD4-208ENST00000563220 TMEM104Q8NE00 496 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 ZC3HAV1LQ96H79 300 aaKnown RBP15.54■□□□□ 0.08
COMMD4-208ENST00000563220 OBP2BQ9NPH6 170 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 KCNN3Q9UGI6 736 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 SLC25A15Q9Y619 301 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 A0A1W2PP11 408 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 MEIOCA2RUB1 952 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 ZNF850A8MQ14 1090 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 SMPD2O60906 423 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 FAM157BP0CG42 384 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 PRKACBP22694 351 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 MRPL49Q13405 166 aaKnown RBP15.54■□□□□ 0.08
COMMD4-208ENST00000563220 CNN3Q15417 329 aaKnown RBP15.54■□□□□ 0.08
COMMD4-208ENST00000563220 SPATA46Q5T0L3 261 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 PNLDC1Q8NA58 520 aaKnown RBP15.54■□□□□ 0.08
COMMD4-208ENST00000563220 OR5L1Q8NGL2 311 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 TNFAIP8L1Q8WVP5 186 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 PHF21AQ96BD5 680 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 ZNF486Q96H40 463 aaPredicted RBP15.54■□□□□ 0.08
COMMD4-208ENST00000563220 EIF3KQ9UBQ5 218 aaKnown RBP15.54■□□□□ 0.08
COMMD4-208ENST00000563220 GPR160Q9UJ42 338 aa15.54■□□□□ 0.08
COMMD4-208ENST00000563220 CD300LBA8K4G0 201 aa15.53■□□□□ 0.08
COMMD4-208ENST00000563220 GABARAPH6UMI1 98 aa15.53■□□□□ 0.08
COMMD4-208ENST00000563220 ORC5O43913 435 aa15.53■□□□□ 0.08
COMMD4-208ENST00000563220 ICMTO60725 284 aa15.53■□□□□ 0.08
COMMD4-208ENST00000563220 IGLV1-44P01699 117 aa15.53■□□□□ 0.08
COMMD4-208ENST00000563220 ALDH3B1P43353 468 aa15.53■□□□□ 0.08
COMMD4-208ENST00000563220 ZP1P60852 638 aa15.53■□□□□ 0.08
COMMD4-208ENST00000563220 KRT74Q7RTS7 529 aa15.53■□□□□ 0.08
COMMD4-208ENST00000563220 LIX1LQ8IVB5 337 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms