RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 HIST2H3PS2Q5TEC6 136 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 LINC01590Q5TEZ4 76 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 FAM27BQ5VT28 67 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SLX4IPQ5VYV7 408 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 TMEM236Q5W0B7 351 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 C12orf73Q69YU5 71 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 GPR139Q6DWJ6 353 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 OR7E24Q6IFN5 339 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 RPL13AP3Q6NVV1 102 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 UGT2A3Q6UWM9 527 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ZNF497Q6ZNH5 498 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 HIST2H3AQ71DI3 136 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ADCK1Q86TW2 530 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 UBE2J2Q8N2K1 259 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 GPR137CQ8N3F9 429 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SLC22A24Q8N4F4 322 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SLC37A3Q8NCC5 494 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 CSNK2A3Q8NEV1 391 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SDR9C7Q8NEX9 313 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 OR6N1Q8NGY5 312 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 OR4K13Q8NH42 304 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 DNAJC9Q8WXX5 260 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 HSD17B8Q92506 261 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 PTP4A1Q93096 173 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ERMAPQ96PL5 475 aaPredicted RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 MBOAT4Q96T53 435 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 NMNAT3Q96T66 252 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 CIB1Q99828 191 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 TSSK6Q9BXA6 273 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ULBP2Q9BZM5 246 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 RACGAP1Q9H0H5 632 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SYT4Q9H2B2 425 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 FN3KQ9H479 309 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 PLEKHF2Q9H8W4 249 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 CMC2Q9NRP2 79 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 MRPL22Q9NWU5 206 aaKnown RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 POFUT2Q9Y2G5 429 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ZNF469Q96JG9 3925 aaPredicted RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 ANK3Q12955 4377 aaKnown RBP3.85□□□□□ -1.79
SMG1-206ENST00000562668 IGLV5-45A0A087WSX0 123 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CCDC182A6NF36 153 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 SHISA9B4DS77 424 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 M0R129 80 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 EI24O14681 340 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 TSPAN4O14817 238 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 PRKYO43930 277 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 SLC16A7O60669 478 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 GOSR1O95249 250 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 HLA-HP01893 362 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 HOXB5P09067 269 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CST2P09228 141 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 FAM106CPP0CH98 169 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CLUP10909 449 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 ZNF35P13682 527 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 COX6B1P14854 86 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CBR1P16152 277 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 SPI1P17947 270 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 GABRB1P18505 474 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CDH2P19022 906 aaPredicted RBP3.85□□□□□ -1.79
SMG1-206ENST00000562668 IL32P24001 234 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 LAP3P28838 519 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CALCRP30988 508 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 GGT2P36268 569 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 ALDH3A2P51648 485 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 SLC25A1P53007 311 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 KRTAP10-3P60369 221 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 ESRRGP62508 458 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 BSPH1Q075Z2 132 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 NPRL3Q12980 569 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 RCN1Q15293 331 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 PCK2Q16822 640 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 RSPO1Q2MKA7 263 aaPredicted RBP3.85□□□□□ -1.79
SMG1-206ENST00000562668 OGFRL1Q5TC84 451 aaPredicted RBP3.85□□□□□ -1.79
SMG1-206ENST00000562668 ZC2HC1BQ5TFG8 222 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 AADACL4Q5VUY2 407 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 OTPQ5XKR4 325 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 LPCAT4Q643R3 524 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 SLC27A4Q6P1M0 643 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 LEG1Q6P5S2 330 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 B3GLCTQ6Y288 498 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 PQLC2Q6ZP29 291 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 HDDC2Q7Z4H3 204 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 ABHD12BQ7Z5M8 362 aaPredicted RBP3.85□□□□□ -1.79
SMG1-206ENST00000562668 MDP1Q86V88 176 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CDC20BQ86Y33 519 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CBR4Q8N4T8 237 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 CYB561A3Q8NBI2 242 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 ICA1LQ8NDH6 482 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 BBS1Q8NFJ9 593 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 SLC26A10Q8NG04 563 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 OR2T33Q8NG76 320 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 OR52E2Q8NGJ4 325 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 OR10S1Q8NGN2 331 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 OR52N5Q8NH56 324 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 OR52I2Q8NH67 350 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 FNDC8Q8TC99 324 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 C11orf40Q8WZ69 217 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 NSMAFQ92636 917 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 ORAI1Q96D31 301 aa3.85□□□□□ -1.79
SMG1-206ENST00000562668 FOXN4Q96NZ1 517 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms