RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 JTBO76095 146 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 IFNA6P05013 189 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 SRFP11831 508 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 CCR5P51681 352 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 DEFB133Q30KQ1 61 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 MDGA2Q7Z553 956 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF679Q8IYX0 411 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF101Q8IZC7 436 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 RAB39BQ96DA2 213 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 SNX22Q96L94 193 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 PHF7Q9BWX1 381 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 ENTPD2Q9Y5L3 495 aa12.46□□□□□ -0.41
GTF3C1-203ENST00000562609 C1QL1O75973 258 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 GPR75O95800 540 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 ABHD16AO95870 558 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 PET100P0DJ07 73 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 ZNF10P21506 573 aaPredicted RBP12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 GABRA3P34903 492 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 THBS4P35443 961 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 RPS27P42677 84 aaKnown RBP12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 TDGF1P3P51864 188 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 CEBPGP53567 150 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 LINC01590Q5TEZ4 76 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 RNF44Q7L0R7 432 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 COX18Q8N8Q8 333 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 OR4N2Q8NGD1 307 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 NPRL2Q8WTW4 380 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 HPSE2Q8WWQ2 592 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 RBM18Q96H35 190 aaKnown RBP12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 CMKLR1Q99788 373 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 PBDC1Q9BVG4 233 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 UBE2ZQ9H832 354 aaPredicted RBP12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 RAB18Q9NP72 206 aa12.46□□□□□ -0.42
GTF3C1-203ENST00000562609 RP1P56715 2156 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 TMEM212A6NML5 194 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 DVL1O14640 695 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 PRH1P02810 166 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 CFPP27918 469 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 AFF3P51826 1226 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 GFERP55789 205 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 FAM3AP98173 230 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 SSPNQ14714 243 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 FAM166AQ6J272 317 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 PTCHD1Q96NR3 888 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 LAMP5Q9UJQ1 280 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 H3BQ15 152 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 FCGR2CP31995 323 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 UBE2KP61086 200 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 BTG2P78543 158 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 HNF4GQ14541 408 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 PRICKLE4Q2TBC4 344 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 ARHGAP11BQ3KRB8 267 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 TMEM128Q5BJH2 165 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 DCST2Q5T1A1 773 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 OR13D1Q8NGV5 346 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 ANKRD9Q96BM1 317 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 RARRES2Q99969 163 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 CBLN4Q9NTU7 201 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 LUZP4Q9P127 313 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 C19orf53Q9UNZ5 99 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 SPACA6W5XKT8 324 aa12.45□□□□□ -0.42
GTF3C1-203ENST00000562609 TMEM269A0A1B0GVZ9 245 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 A6NNC1 897 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 C10orf142B7Z368 130 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 TGFBR3LH3BV60 316 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 K7EPK0 472 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 MYF5P13349 255 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 NID1P14543 1247 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 PI3P19957 117 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 NPY4RP50391 375 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 TMEM33P57088 247 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 TAS2R31P59538 309 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 FHL5Q5TD97 284 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 SLC22A25Q6T423 547 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 CLEC18BQ6UXF7 455 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 FAM71E2Q8N5Q1 922 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 CMBLQ96DG6 245 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 NMNAT2Q9BZQ4 307 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 SLC26A1Q9H2B4 701 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 DBIP07108 87 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 DANCRP0C864 163 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 ASPHD2Q6ICH7 369 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 SLC16A9Q7RTY1 509 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 KDM8Q8N371 416 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 HSD17B11Q8NBQ5 300 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 OR52R1Q8NGF1 315 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 C2orf50Q96LR7 162 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 LYRM4Q9HD34 91 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 FLRT3Q9NZU0 649 aa12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 MRPS18BQ9Y676 258 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-203ENST00000562609 ARID1BQ8NFD5 2236 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 A0A1B0GWA3 101 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 DCDC2BA2VCK2 349 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 IGLV3-19P01714 112 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 GAPDHP04406 335 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 CD38P28907 300 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 BLKP51451 505 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms