RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 OR4C11Q6IEV9 310 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SLC25A47Q6Q0C1 308 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 DPY19L2P2Q6ZN68 376 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 Q6ZTC4 211 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 LINC00336Q6ZUF6 198 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 RFPL4BQ6ZWI9 263 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PEX26Q7Z412 305 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GKN2Q86XP6 184 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ZNF547Q8IVP9 402 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TMEM251Q8N6I4 163 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ADAD2Q8NCV1 583 aaKnown RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PXT1Q8NFP0 134 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 OR2L5Q8NG80 312 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 OR4F6Q8NGB9 312 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 OR51D1Q8NGF3 324 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 OR13C5Q8NGS8 318 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 OR9A4Q8NGU2 314 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 MAGEE2Q8TD90 523 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 PATE1Q8WXA2 126 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TMEM190Q8WZ59 177 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ISOC2Q96AB3 205 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 DGCR14Q96DF8 476 aaKnown RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ATXN7L3BQ96GX2 97 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 CXorf58Q96LI9 332 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 OR2M4Q96R27 311 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 STACQ99469 402 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 VAT1Q99536 393 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 RBBP8Q99708 897 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ALX4Q9H161 411 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 TUBB1Q9H4B7 451 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 C5orf66Q9H5L9 145 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 CAB39LQ9H9S4 337 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 UGT1A7Q9HAW7 530 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 NANSQ9NR45 359 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GID8Q9NWU2 228 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 THUMPD1Q9NXG2 353 aaKnown RBP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GPR83Q9NYM4 423 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 POMT2Q9UKY4 750 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 GUCA1BQ9UMX6 200 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 KLHDC2Q9Y2U9 406 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 DHRS7Q9Y394 339 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.4□□□□□ -1.87
LRRC28-222ENST00000561431 FKBP7Q9Y680 259 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ARL5AQ9Y689 179 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 SAR1BQ9Y6B6 198 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 ZFYVE26Q68DK2 2539 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 MYLKQ15746 1914 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 CELSR3Q9NYQ7 3312 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 LAMA5O15230 3695 aa3.4□□□□□ -1.87
LRRC28-222ENST00000561431 CFAP46Q8IYW2 2715 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 A0A1B0GV72 72 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 LRP5LA4QPB2 252 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 MSGN1A6NI15 193 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 ZNF98A6NK75 572 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 SLC22A20A6NK97 555 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 PCNX2A6NKB5 2137 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 VSTM2BA6NLU5 285 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 H0YL77 283 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 H7C0C1 242 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 DCTN6O00399 190 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 RAMP3O60896 148 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 GLSO94925 669 aaPredicted RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 TNFAIP8O95379 198 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 RPLP0P05388 317 aaKnown RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 TFPTP0C1Z6 253 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 NBEAP1P0C6P0 100 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 SLC35G4P0C7Q5 338 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 CFC1BP0CG36 223 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 CFC1P0CG37 223 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 HLA-GP17693 338 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 PGCP20142 388 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 DCKP27707 260 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 RPL13AP40429 203 aaKnown RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 OR3A3P47888 321 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 ZNF140P52738 457 aaPredicted RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 TMEM33P57088 247 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 MRPS22P82650 360 aaKnown RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 VLDLRP98155 873 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 EWSR1Q01844 656 aaKnown RBP eCLIP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 KLRB1Q12918 225 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 SRSF6Q13247 344 aaKnown RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 TPBGQ13641 420 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 ARL6IP1Q15041 203 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 SIX1Q15475 284 aaPredicted RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 SLC9A3R2Q15599 337 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 MS4A18Q3C1V0 323 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 TMEM176BQ3YBM2 270 aaPredicted RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 RBM48Q5RL73 367 aaKnown RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.39□□□□□ -1.87
LRRC28-222ENST00000561431 RTL6Q6ICC9 239 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 ZNF544Q6NX49 715 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 HACD2Q6Y1H2 254 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 IDO2Q6ZQW0 420 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 ACOT7LQ6ZUV0 252 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 AHSA2Q719I0 299 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 COX15Q7KZN9 410 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 ANKRD37Q7Z713 158 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 MOB3BQ86TA1 216 aa3.39□□□□□ -1.87
LRRC28-222ENST00000561431 UBL4BQ8N7F7 174 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms