RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 FGD3Q5JSP0 725 aa14.46□□□□□ -0.09
TSPAN3-208ENST00000560514 MAP6Q96JE9 813 aa14.46□□□□□ -0.09
TSPAN3-208ENST00000560514 OR5M11Q96RB7 305 aa14.46□□□□□ -0.09
TSPAN3-208ENST00000560514 COPS4Q9BT78 406 aa14.46□□□□□ -0.09
TSPAN3-208ENST00000560514 PRSS22Q9GZN4 317 aa14.46□□□□□ -0.09
TSPAN3-208ENST00000560514 TRBV23-1A0A0A0MS06 115 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 TRBV4-1A0A0J9YWV2 114 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 ADARB2-AS1A8MUL3 147 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 CDIPTO14735 213 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 SNX3O60493 162 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 PAX6P26367 422 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 IFNGR2P38484 337 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 SEC23BQ15437 767 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 WDR86Q86TI4 376 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 FAM185AQ8N0U4 392 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 OR4K13Q8NH42 304 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 DDOQ99489 341 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 HEXA-AS1Q9H8Q6 139 aa14.45□□□□□ -0.1
TSPAN3-208ENST00000560514 WI2-2373I1.2A0A1W2PRP0 233 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 TBX1O43435 398 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 GADD45GO95257 159 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 DUS4LO95620 317 aaKnown RBP14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 SEMG1P04279 462 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 ALDOBP05062 364 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 SLC2A1P11166 492 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 AMY2BP19961 511 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 SLC6A6P31641 620 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 PRKXP51817 358 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 CAV3P56539 151 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 FXYD6P3P58550 94 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 CNN3Q15417 329 aaKnown RBP14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 DGUOKQ16854 277 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 TIGD6Q17RP2 521 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 HCP5Q6MZN7 132 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 ZNF788Q6ZQV5 615 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 ZBTB46Q86UZ6 589 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 Q8N2B8 174 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 FANK1Q8TC84 345 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 DPF1Q92782 380 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 MCUR1Q96AQ8 359 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 RCC1LQ96I51 464 aaKnown RBP14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 GAFA1Q96PS6 74 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 B9D2Q9BPU9 175 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 MICU1Q9BPX6 476 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 ABCB10Q9NRK6 738 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 CD300AQ9UGN4 299 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 MAGEL2Q9UJ55 1249 aa14.44□□□□□ -0.1
TSPAN3-208ENST00000560514 A0A1W2PPH5 198 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 ANXA2P2A6NMY6 339 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 HIST1H1CP16403 213 aaKnown RBP14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 GABRA2P47869 451 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 HMGA2P52926 109 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 DCTN2Q13561 401 aaKnown RBP14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 SAMD4BQ5PRF9 694 aaKnown RBP14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 CYB561A3Q8NBI2 242 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 OR10Z1Q8NGY1 313 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 OR52J3Q8NH60 311 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 RAB3IPQ96QF0 476 aaPredicted RBP14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 IFT27Q9BW83 186 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 PAPOLGQ9BWT3 736 aaKnown RBP14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 CDCA4Q9BXL8 241 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 FN3KQ9H479 309 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 IL1RAPQ9NPH3 570 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 CENPMQ9NSP4 180 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 PITPNC1Q9UKF7 332 aa14.43□□□□□ -0.1
TSPAN3-208ENST00000560514 hCG_1809904A0A1W2PP81 198 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 A0A1W2PPE2 198 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 A0A1W2PR64 198 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 A0A1W2PRV1 198 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 SIGLEC5O15389 551 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 KRT36O76013 467 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 CLIC3O95833 236 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 OTX1P32242 354 aaPredicted RBP14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 RPS27P42677 84 aaKnown RBP14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 VDAC2P45880 294 aaPredicted RBP14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 IL5RAQ01344 420 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 PLA1AQ53H76 456 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 SLC16A9Q7RTY1 509 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 PGAM4Q8N0Y7 254 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 FTMTQ8N4E7 242 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 FAM86B1Q8N7N1 296 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 SDR9C7Q8NEX9 313 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 AJUBAQ96IF1 538 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 KCNJ15Q99712 375 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 RTL8AQ9BWD3 113 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 WDR13Q9H1Z4 485 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 ELL3Q9HB65 397 aaPredicted RBP14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 MRPL22Q9NWU5 206 aaKnown RBP14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 NDE1Q9NXR1 346 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 TCF19Q9Y242 345 aa14.42□□□□□ -0.1
TSPAN3-208ENST00000560514 DIRAS1O95057 198 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 ANXA2P07355 339 aaKnown RBP14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 ACAA1P09110 424 aaPredicted RBP14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 ANOS1P23352 680 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 CAPZA1P52907 286 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 SNCBQ16143 134 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 KCTD8Q6ZWB6 473 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 DCXRQ7Z4W1 244 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 ZDHHC21Q8IVQ6 265 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms