RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 LYNX1P0DP58 116 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 CDH15P55291 814 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 DSCR9P59020 149 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 SLC3A1Q07837 685 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 MZT1Q08AG7 82 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 CLVS2Q5SYC1 327 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 WDR86Q86TI4 376 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 OR13C3Q8NGS6 347 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 C10orf105Q8TEF2 133 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 OR5P3Q8WZ94 311 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 FAM168AQ92567 244 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 CHST5Q9GZS9 411 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 FGF23Q9GZV9 251 aaPredicted RBP18.34■□□□□ 0.53
SNX1-206ENST00000559389 CHODLQ9H9P2 273 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 DLL4Q9NR61 685 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 C14orf119Q9NWQ9 140 aa18.34■□□□□ 0.53
SNX1-206ENST00000559389 ARID1AO14497 2285 aa18.33■□□□□ 0.53
SNX1-206ENST00000559389 LOC100289279A0A1B0GTE1 492 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 PNMA8CA0A1B0GUJ8 204 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 PLPP2O43688 288 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 NRASP01111 189 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 CD1AP06126 327 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 COL8A2P25067 703 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 PRAMEF6Q5VXH4 476 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 ZNF773Q6PK81 442 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 ZNF367Q7RTV3 350 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 SVOPQ8N4V2 548 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 ADAT3Q96EY9 351 aaPredicted RBP18.33■□□□□ 0.52
SNX1-206ENST00000559389 Q96MF0 132 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 MICU1Q9BPX6 476 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 RTL8AQ9BWD3 113 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 GCM1Q9NP62 436 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 ACOT13Q9NPJ3 140 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 ZNF275Q9NSD4 429 aaPredicted RBP18.33■□□□□ 0.52
SNX1-206ENST00000559389 ZNF281Q9Y2X9 895 aa18.33■□□□□ 0.52
SNX1-206ENST00000559389 IGHV3-64DA0A0J9YX35 117 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 ANKRD61A6NGH8 418 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 A6NIN4 97 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 NDUFS8O00217 210 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 CELP19835 753 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 GIFP27352 417 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 CHN2P52757 468 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 CARTPTQ16568 116 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 HFEQ30201 348 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 CEP78Q5JTW2 689 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 PLCXD3Q63HM9 321 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 TGIF2LYQ8IUE0 185 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 SPARTQ8N0X7 666 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 GPR148Q8TDV2 347 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 TSEN15Q8WW01 171 aaKnown RBP18.32■□□□□ 0.52
SNX1-206ENST00000559389 PP6455Q8WZ26 134 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 GHSRQ92847 366 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 ISYNA1Q9NPH2 558 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 GPR173Q9NS66 373 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 PPP1R3CQ9UQK1 317 aa18.32■□□□□ 0.52
SNX1-206ENST00000559389 IGHV4-30-2A0A087WSY4 118 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 OR5B21A6NL26 309 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 VWC2LB2RUY7 222 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 ZNF20P17024 532 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 THBS2P35442 1172 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 MLLT11Q13015 90 aaPredicted RBP18.31■□□□□ 0.52
SNX1-206ENST00000559389 HNRNPA0Q13151 305 aaKnown RBP18.31■□□□□ 0.52
SNX1-206ENST00000559389 RIN1Q13671 783 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 MPPED2Q15777 294 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 CEACAM21Q3KPI0 293 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 YIF1BQ5BJH7 314 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 SPNS3Q6ZMD2 512 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 MOB3CQ70IA8 216 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 MOGAT3Q86VF5 341 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 OR13C5Q8NGS8 318 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 ERGIC1Q969X5 290 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 PIMREGQ9BSJ6 248 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 TREM2Q9NZC2 230 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 DHDHQ9UQ10 334 aa18.31■□□□□ 0.52
SNX1-206ENST00000559389 TRBV5-5A0A0J9YX44 114 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 TMEM210A6NLX4 147 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 GATBO75879 557 aaKnown RBP18.3■□□□□ 0.52
SNX1-206ENST00000559389 TNFAIP8O95379 198 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 RPS11P62280 158 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNX1-206ENST00000559389 EMX1Q04741 257 aaPredicted RBP18.3■□□□□ 0.52
SNX1-206ENST00000559389 ZNF154Q13106 437 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 ZNF181Q2M3W8 571 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 UTS2BQ765I0 119 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 OR1M1Q8NGA1 313 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 ZNF420Q8TAQ5 688 aaPredicted RBP18.3■□□□□ 0.52
SNX1-206ENST00000559389 Q8TCH9 128 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 FGGYQ96C11 551 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 RNF170Q96K19 258 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 OPALINQ96PE5 141 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 TECTBQ96PL2 329 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 HIST1H2AAQ96QV6 131 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 TLNRD1Q9H1K6 362 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 TMEM106BQ9NUM4 274 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 DCAF16Q9NXF7 216 aa18.3■□□□□ 0.52
SNX1-206ENST00000559389 CCDC168Q8NDH2 2452 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 CLDN25C9JDP6 229 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 IFNL4K9M1U5 179 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 GRPP07492 148 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 HSMCR30P0CW71 290 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 PCMT1P22061 227 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms