RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 IGHV1-69-2A0A0G2JMI3 117 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 ANKRD30BLA7E2S9 258 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.18□□□□□ -0.94
TPM1-217ENST00000559108 PIN1P1O15428 100 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 GMDSO60547 372 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 ZNF205O95201 554 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 CYB5R3P00387 301 aaPredicted RBP9.18□□□□□ -0.94
TPM1-217ENST00000559108 BMP4P12644 408 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 GIFP27352 417 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 IL2RGP31785 369 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 LIPAP38571 399 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 DDOSTP39656 456 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 GATA4P43694 442 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 MAP2K3P46734 347 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 SOX2P48431 317 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 GP2P55259 537 aaKnown RBP9.18□□□□□ -0.94
TPM1-217ENST00000559108 EMX1Q04741 257 aaPredicted RBP9.18□□□□□ -0.94
TPM1-217ENST00000559108 RIPPLY1Q0D2K3 151 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 ZNF154Q13106 437 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 SPHARQ15513 63 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 TBCEQ15813 527 aaPredicted RBP9.18□□□□□ -0.94
TPM1-217ENST00000559108 CARTPTQ16568 116 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 MOGQ16653 247 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 CCDC58Q4VC31 144 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 ZMAT1Q5H9K5 638 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 AVPI1Q5T686 147 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 RPL22L1Q6P5R6 122 aaKnown RBP9.18□□□□□ -0.94
TPM1-217ENST00000559108 PRSS57Q6UWY2 283 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 EGFL6Q8IUX8 553 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 ZNF676Q8N7Q3 588 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 CSNK2A3Q8NEV1 391 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 NPRL2Q8WTW4 380 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 RDH5Q92781 318 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 GHSRQ92847 366 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 FGGYQ96C11 551 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 BPESC1Q9GZL8 116 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 CCDC90BQ9GZT6 254 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 BARX1Q9HBU1 254 aaPredicted RBP9.18□□□□□ -0.94
TPM1-217ENST00000559108 ACOT13Q9NPJ3 140 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 TRIM36Q9NQ86 728 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 DLL4Q9NR61 685 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 TRBV5-5A0A0J9YX44 114 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 PQLC2LA1A4F0 135 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 MAGEA13PA6NCF6 341 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 TMEM212A6NML5 194 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 RNF223E7ERA6 249 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 TPD52L2O43399 206 aaKnown RBP9.17□□□□□ -0.94
TPM1-217ENST00000559108 PLPP2O43688 288 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 RHBDL1O75783 438 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 ATP6V1B1P15313 513 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 CELP19835 753 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 EEF1B2P24534 225 aaKnown RBP9.17□□□□□ -0.94
TPM1-217ENST00000559108 RPS25P62851 125 aaKnown RBP9.17□□□□□ -0.94
TPM1-217ENST00000559108 KRTAP1-1Q07627 177 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 ACSM1Q08AH1 577 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 MRPL28Q13084 256 aaKnown RBP9.17□□□□□ -0.94
TPM1-217ENST00000559108 MED22Q15528 200 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 SSX1Q16384 188 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 FAM27D1Q5T7N8 215 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 ZBTB37Q5TC79 503 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 TMEM244Q5VVB8 128 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 SHEQ5VZ18 495 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 SPNS3Q6ZMD2 512 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 MOB3CQ70IA8 216 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 ZDHHC23Q8IYP9 409 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 OR51A2Q8NGJ7 313 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 OR5AK2Q8NH90 309 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 FAM168AQ92567 244 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 CCL17Q92583 94 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 RPL3LQ92901 407 aaKnown RBP9.17□□□□□ -0.94
TPM1-217ENST00000559108 SEH1LQ96EE3 360 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 DIRC2Q96SL1 478 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 MND1Q9BWT6 205 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 CHST5Q9GZS9 411 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 TLNRD1Q9H1K6 362 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 PPIL3Q9H2H8 161 aaKnown RBP9.17□□□□□ -0.94
TPM1-217ENST00000559108 DECR2Q9NUI1 292 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 ENPP5Q9UJA9 477 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 FBXO9Q9UK97 447 aaPredicted RBP9.17□□□□□ -0.94
TPM1-217ENST00000559108 HHLA2Q9UM44 414 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 EDARQ9UNE0 448 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 ERGIC3Q9Y282 383 aa9.17□□□□□ -0.94
TPM1-217ENST00000559108 SF3B6Q9Y3B4 125 aaKnown RBP9.17□□□□□ -0.94
TPM1-217ENST00000559108 F8P00451 2351 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 MED13LQ71F56 2210 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 ARHGAP32A7KAX9 2087 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 TRAV8-7A0A075B6U6 113 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 A0A1W2PPK0 400 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 LRP5LA4QPB2 252 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 DHRS7CA6NNS2 312 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 TMEM178BH3BS89 294 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 H7C1Q1 480 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 SYNGR1O43759 233 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 FCN3O75636 299 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 INMTO95050 263 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 NRASP01111 189 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 TFF1P04155 84 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 GRPP07492 148 aa9.16□□□□□ -0.94
TPM1-217ENST00000559108 SMIM18P0DKX4 95 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms