RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 FAM46BQ96A09 425 aa11.21□□□□□ -0.61
SMAD3-207ENST00000558763 CYYR1Q96J86 154 aa11.21□□□□□ -0.61
SMAD3-207ENST00000558763 LPAR5Q9H1C0 372 aa11.21□□□□□ -0.61
SMAD3-207ENST00000558763 GLRX2Q9NS18 164 aa11.21□□□□□ -0.61
SMAD3-207ENST00000558763 NUDT15Q9NV35 164 aa11.21□□□□□ -0.61
SMAD3-207ENST00000558763 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.61
SMAD3-207ENST00000558763 ALG5Q9Y673 324 aa11.21□□□□□ -0.61
SMAD3-207ENST00000558763 PRR14LQ5THK1 2151 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 INMT-MINDY4F8WBC2 141 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 PRRG2O14669 202 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 WDR1O75083 606 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 ECDO95905 644 aaPredicted RBP11.21□□□□□ -0.62
SMAD3-207ENST00000558763 PRB1P04280 392 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 TCRBP04435 133 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 HCKP08631 526 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 RANBP1P43487 201 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 BTG1P62324 171 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 RBPJQ06330 500 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 OR2W3Q7Z3T1 314 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 ACBD4Q8NC06 268 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 NPRL2Q8WTW4 380 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 AQP3Q92482 292 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 CMBLQ96DG6 245 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 SEH1LQ96EE3 360 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 RNF170Q96K19 258 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 POM121L2Q96KW2 1035 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 NICN1Q9BSH3 213 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 CACNG6Q9BXT2 260 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 DPAGT1Q9H3H5 408 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 RGCCQ9H4X1 137 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 ZNF391Q9UJN7 358 aa11.21□□□□□ -0.62
SMAD3-207ENST00000558763 NBASA2RRP1 2371 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 IGKV1-27A0A075B6S5 117 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 TRAPPC2P0DI81 140 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 TRAPPC2BP0DI82 140 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 CCL2P13500 99 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 HLA-DMAP28067 261 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 KIR2DL2P43627 348 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-207ENST00000558763 GSK3AP49840 483 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 ZP1P60852 638 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 RAB1AP62820 205 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 ZNF260Q3ZCT1 412 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 RTL6Q6ICC9 239 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 FAAP20Q6NZ36 180 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 FAM214BQ7L5A3 538 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 DOLPP1Q86YN1 238 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 ST6GAL2Q96JF0 529 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 FAM215AQ9Y5M1 114 aa11.2□□□□□ -0.62
SMAD3-207ENST00000558763 CENPXA8MT69 81 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 STOMP27105 288 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 PRSS3P35030 304 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 RAB25P57735 213 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 RIPPLY1Q0D2K3 151 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 C1orf185Q5T7R7 199 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 SEM1Q6ZVN7 128 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 ST6GALNAC3Q8NDV1 305 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 OR5D18Q8NGL1 313 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 PIGTQ969N2 578 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 NUDT16L1Q9BRJ7 211 aaKnown RBP11.19□□□□□ -0.62
SMAD3-207ENST00000558763 TP63Q9H3D4 680 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-207ENST00000558763 ZMAT3Q9HA38 289 aaKnown RBP11.19□□□□□ -0.62
SMAD3-207ENST00000558763 GPR173Q9NS66 373 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 NUBP2Q9Y5Y2 271 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 CHD6Q8TD26 2715 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 TRAV6A0A075B6T7 132 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 C7orf66A4D0T2 115 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 MEIS3P1A6NDR6 274 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 TMEM235A6NFC5 223 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 HMX3A6NHT5 357 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 FOXI3A8MTJ6 420 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-207ENST00000558763 SULT1C2O00338 296 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 XRCC2O43543 280 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 CDC14BO60729 498 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 CD79AP11912 226 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 IGHV1-2P23083 117 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 ARR3P36575 388 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 PTGFRP43088 359 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 AP3S2P59780 193 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 TBRG1Q3YBR2 411 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 NSUN5P2Q63ZY6 315 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 BTN2A1Q7KYR7 527 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 OR4D10Q8NGI6 311 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 WNT2BQ93097 391 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 MS4A3Q96HJ5 214 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 SCPEP1Q9HB40 452 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 CRIM1Q9NZV1 1036 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
SMAD3-207ENST00000558763 C5orf49A4QMS7 147 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 NAP1L6A6NFF2 107 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 RBBP9O75884 186 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 LPLP06858 475 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 MELTFP08582 738 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 WNT5AP41221 380 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 PER3P56645 1201 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 SSBP1Q04837 148 aaKnown RBP11.18□□□□□ -0.62
SMAD3-207ENST00000558763 FOXF2Q12947 444 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 MRPL49Q13405 166 aaKnown RBP11.18□□□□□ -0.62
SMAD3-207ENST00000558763 SF3B4Q15427 424 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMAD3-207ENST00000558763 PCGF3Q3KNV8 242 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms