RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 ERVK13-1Q9NX77 482 aa13.32□□□□□ -0.28
RABGGTA-206ENST00000558649 RNF7Q9UBF6 113 aa13.32□□□□□ -0.28
RABGGTA-206ENST00000558649 ENPP5Q9UJA9 477 aa13.32□□□□□ -0.28
RABGGTA-206ENST00000558649 PPIAL4EA0A075B759 164 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 A0A1B0GTI1 187 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 LOC107986453A0A1B0GWG9 222 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 PPIAL4DF5H284 164 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 SYT7O43581 403 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 PTBP3O95758 552 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 PPIAL4FP0DN26 164 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 ATP6V1B1P15313 513 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 THBS2P35442 1172 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 GPM6AP51674 278 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 ZNF154Q13106 437 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 SFRP4Q6FHJ7 346 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 IL17RELQ6ZVW7 336 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 KCTD20Q7Z5Y7 419 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 GLCCI1Q86VQ1 547 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 LRRC28Q86X40 367 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 RDH10Q8IZV5 341 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 MUC20Q8N307 709 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 OR14K1Q8NGZ2 314 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 OR2G2Q8NGZ5 317 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 OR51F2Q8NH61 342 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 HPSE2Q8WWQ2 592 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 RPL3LQ92901 407 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 PELI1Q96FA3 418 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 RNF170Q96K19 258 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 FGF23Q9GZV9 251 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 METTL17Q9H7H0 456 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 ABCB9Q9NP78 766 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 INPP5EQ9NRR6 644 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 GPR173Q9NS66 373 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 PPIAL4AQ9Y536 164 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 V9GYS6 101 aa13.31□□□□□ -0.28
RABGGTA-206ENST00000558649 ABCA1O95477 2261 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 C3orf80F5H4A9 247 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 ATP6V1G2O95670 118 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 NRASP01111 189 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 MSMBP08118 114 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 UBCP0CG48 685 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 NANOS3P60323 173 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 GMFBP60983 142 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 LCN2P80188 198 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 TMEM155Q4W5P6 130 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 PLPP7Q8NBV4 271 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 LRRC29Q8WV35 223 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 TFAP2CQ92754 450 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 RNF166Q96A37 237 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 C1orf159Q96HA4 380 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 MYCBPQ99417 103 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 VCX3BQ9H321 246 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 MRPS18AQ9NVS2 196 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 FRRS1LQ9P0K9 344 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 HSPE1-MOB4S4R3N1 261 aa13.3□□□□□ -0.28
RABGGTA-206ENST00000558649 IRGMA1A4Y4 181 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 CEACAM18A8MTB9 384 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 ZNF732B4DXR9 585 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 CDIPTO14735 213 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 XPNPEP2O43895 674 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 RPS2P15880 293 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 EGR1P18146 543 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 CCL1P22362 96 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 ETV1P50549 477 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 RIPPLY3P57055 190 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 SEC61A1P61619 476 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 CLVS2Q5SYC1 327 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 ZBTB37Q5TC79 503 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 WDR82Q6UXN9 313 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 SYS1Q8N2H4 156 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 TMEM186Q96B77 213 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 TMEM246Q9BRR3 403 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 PATZ1Q9HBE1 687 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 TMEM165Q9HC07 324 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 FGF20Q9NP95 211 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 HIF1ANQ9NWT6 349 aa13.29□□□□□ -0.28
RABGGTA-206ENST00000558649 MALRD1Q5VYJ5 2156 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 CSPG4Q6UVK1 2322 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 IGHV3OR15-7A0A075B7D8 119 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 TMEM210A6NLX4 147 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 PLPP2O43688 288 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 LIMS3P0CW19 117 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 LIMS4P0CW20 117 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 HOXB4P17483 251 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 MYL12AP19105 171 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 DCKP27707 260 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 DVL1P1P54792 670 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 ALKBH1Q13686 389 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 CR1LQ2VPA4 569 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 CEACAM21Q3KPI0 293 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 ZNF404Q494X3 552 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 IZUMO2Q6UXV1 221 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 C11orf53Q8IXP5 236 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 GCSAMQ8N6F7 178 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 ZNF676Q8N7Q3 588 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 SCCPDHQ8NBX0 429 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 BPIFB6Q8NFQ5 453 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 TRMT10AQ8TBZ6 339 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 NPRL2Q8WTW4 380 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 GGHQ92820 318 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms