RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 OR10Z1Q8NGY1 313 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 OR2AE1Q8NHA4 323 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 MUC7Q8TAX7 377 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SEH1LQ96EE3 360 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 MALSU1Q96EH3 234 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 TPD52L3Q96J77 140 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 TSSK2Q96PF2 358 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 RAB3IPQ96QF0 476 aaPredicted RBP4.18□□□□□ -1.74
SPG11-208ENST00000558155 MICU1Q9BPX6 476 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 NSRP1Q9H0G5 558 aaKnown RBP4.18□□□□□ -1.74
SPG11-208ENST00000558155 MUC13Q9H3R2 512 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 OPA3Q9H6K4 179 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SP140LQ9H930 580 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 NRIP3Q9NQ35 241 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 INPP5EQ9NRR6 644 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SNTG1Q9NSN8 517 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 ADA2Q9NZK5 511 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 CYB5R1Q9UHQ9 305 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 KCNG2Q9UJ96 466 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 TCF19Q9Y242 345 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 TMEM5Q9Y2B1 443 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 N6AMT1Q9Y5N5 214 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 A0A087WUU8 490 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 FAM90A8PA6NJQ4 464 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 ANXA2P2A6NMY6 339 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.17□□□□□ -1.74
SPG11-208ENST00000558155 DYNC1I1O14576 645 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 CDC42EP2O14613 210 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 IMPA2O14732 288 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 SIGLEC5O15389 551 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 XRCC2O43543 280 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 TXNDC12O95881 172 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 CHRM2P08172 466 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 TROVE2P10155 538 aaKnown RBP eCLIP4.17□□□□□ -1.74
SPG11-208ENST00000558155 PAX6P26367 422 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 NOS3P29474 1203 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 KDELR2P33947 212 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 GNALP38405 381 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 YAP1P46937 504 aaKnown RBP4.17□□□□□ -1.74
SPG11-208ENST00000558155 SLC25A1P53007 311 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 ERVFRD-1P60508 538 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 GMFBP60983 142 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 IL5RAQ01344 420 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 ZSCAN26Q16670 478 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 DGUOKQ16854 277 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 SNAI3Q3KNW1 292 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 GLYATL3Q5SZD4 288 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 STUMQ69YW2 141 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 NANOGP8Q6NSW7 305 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 TBPL2Q6SJ96 375 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 CFAP77Q6ZQR2 320 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 PTCHD4Q6ZW05 846 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 TMEM219Q86XT9 240 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 CALHM1Q8IU99 346 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 OFCC1Q8IZS5 231 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 OR6V1Q8N148 313 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 MREGQ8N565 214 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 SLC26A10Q8NG04 563 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 OR51D1Q8NGF3 324 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 OR4X2Q8NGF9 303 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 OR5K1Q8NHB7 308 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 ANGPTL6Q8NI99 470 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 MYDGFQ969H8 173 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 FOXRED1Q96CU9 486 aaPredicted RBP4.17□□□□□ -1.74
SPG11-208ENST00000558155 C7orf26Q96N11 449 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 GPX7Q96SL4 187 aaPredicted RBP4.17□□□□□ -1.74
SPG11-208ENST00000558155 EBF4Q9BQW3 602 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 TLNRD1Q9H1K6 362 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 PALMDQ9NP74 551 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 PNRC2Q9NPJ4 139 aaKnown RBP4.17□□□□□ -1.74
SPG11-208ENST00000558155 RHCGQ9UBD6 479 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 NLKQ9UBE8 527 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 SIGLEC7Q9Y286 467 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 TBL2Q9Y4P3 447 aaKnown RBP4.17□□□□□ -1.74
SPG11-208ENST00000558155 LRP12Q9Y561 859 aa4.17□□□□□ -1.74
SPG11-208ENST00000558155 TENM3Q9P273 2699 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 IGLV1-36A0A0B4J1U3 117 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 LCE6AA0A183 80 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 UNC119BA6NIH7 251 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 TMEM210A6NLX4 147 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 OR2AT4A6NND4 320 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 DCTN6O00399 190 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 TBX1O43435 398 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 AKR7A2O43488 359 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 NPPAP01160 153 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 APOC1P02654 83 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 LYL1P12980 280 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 SELLP14151 372 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 GLRA1P23415 457 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 CFL1P23528 166 aaKnown RBP4.16□□□□□ -1.74
SPG11-208ENST00000558155 COX7A1P24310 79 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 SLC15A1P46059 708 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 DYNLT3P51808 116 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 PRKXP51817 358 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 CAPZA1P52907 286 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 GP2P55259 537 aaKnown RBP4.16□□□□□ -1.74
SPG11-208ENST00000558155 OR12D2P58182 307 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 RPL31P62899 125 aaKnown RBP4.16□□□□□ -1.74
SPG11-208ENST00000558155 CSNK2BP67870 215 aa4.16□□□□□ -1.74
SPG11-208ENST00000558155 SSX2Q16385 188 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms