RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 EMC6Q9BV81 110 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 SLC25A2Q9BXI2 301 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 PARD6GQ9BYG4 376 aaPredicted RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 DERL2Q9GZP9 239 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 TOLLIPQ9H0E2 274 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 DHX35Q9H5Z1 703 aaKnown RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 IL17CQ9P0M4 197 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 VAX2Q9UIW0 290 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 TBL2Q9Y4P3 447 aaKnown RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 HES2Q9Y543 173 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 F11RQ9Y624 299 aaKnown RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 NFASCO94856 1347 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 MAP3K15Q6ZN16 1313 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 PCDH11XQ9BZA7 1347 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 RAB3GAP2Q9H2M9 1393 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 PDS5BQ9NTI5 1447 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 ADAMTSL3P82987 1691 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 PLEKHG1Q9ULL1 1385 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 IGHV1-69DA0A0B4J2H0 117 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 A0A0J9YXV3 536 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 J3QT63 122 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 HDAC3O15379 428 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 FGF16O43320 207 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 SSNA1O43805 119 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 UGT2B11O75310 529 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 MMP23AO75900 390 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 SEMA3DO95025 777 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 RLN2P04090 185 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 COX5BP10606 129 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 FOLR2P14207 255 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 NQO1P15559 274 aaKnown RBP2.8□□□□□ -1.96
TDP1-217ENST00000557782 TTPAP49638 278 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 ERFP50548 548 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 NDUFA8P51970 172 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 DLX6P56179 175 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 SYNJ2BPP57105 145 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 KIAA0040Q15053 153 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 RGNQ15493 299 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 TTC32Q5I0X7 151 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 ATAD3CQ5T2N8 411 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 METTL21CQ5VZV1 264 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 LPCAT4Q643R3 524 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 MED27Q6P2C8 311 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 ARL9Q6T311 187 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 RTL4Q6ZR62 310 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 ZNF440Q8IYI8 595 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 Q8N402 240 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 C2orf73Q8N5S3 287 aaPredicted RBP2.8□□□□□ -1.96
TDP1-217ENST00000557782 GPR26Q8NDV2 337 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 ACTRT1Q8TDG2 376 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 RERGQ96A58 199 aaPredicted RBP2.8□□□□□ -1.96
TDP1-217ENST00000557782 ZNF689Q96CS4 500 aaPredicted RBP2.8□□□□□ -1.96
TDP1-217ENST00000557782 MRAP2Q96G30 205 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 RILPQ96NA2 401 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 RBP7Q96R05 134 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 VGLL1Q99990 258 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 TMED9Q9BVK6 235 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 DEFB126Q9BYW3 111 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 LHX5Q9H2C1 402 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 LINC00597Q9H2U6 94 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 RHOFQ9HBH0 211 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 TMEM27Q9HBJ8 222 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 C12orf4Q9NQ89 552 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 TMEM100Q9NV29 134 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 ZNF226Q9NYT6 803 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 COMMD9Q9P000 198 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 KLK13Q9UKR3 277 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 ORC6Q9Y5N6 252 aa2.8□□□□□ -1.96
TDP1-217ENST00000557782 TRAV8-6A0A0B4J262 113 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 OR6C70A6NIJ9 312 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 CENPBD1B2RD01 187 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 LRRN3E7EW58 273 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 KRTAP4-16G5E9R7 235 aaPredicted RBP2.79□□□□□ -1.96
TDP1-217ENST00000557782 H0Y980 276 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 H0Y9J4 135 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 M0QZ92 97 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 SYNGR1O43759 233 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 RBBP9O75884 186 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 SUPT7LO94864 414 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 SLC25A27O95847 323 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 THY1P04216 161 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 CELP19835 753 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 FUT3P21217 361 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 PAX6P26367 422 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 PSMB2P49721 201 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 CAV2P51636 162 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 RPL10AP62906 217 aaKnown RBP2.79□□□□□ -1.96
TDP1-217ENST00000557782 MRPS25P82663 173 aaKnown RBP2.79□□□□□ -1.96
TDP1-217ENST00000557782 INCA1Q0VD86 236 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 LAMTOR4Q0VGL1 99 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 GINS1Q14691 196 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 IMPG1Q17R60 797 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 SLC25A35Q3KQZ1 300 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 DNAL1Q4LDG9 190 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 TCEAL5Q5H9L2 206 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 HHATQ5VTY9 493 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 FBXW12Q6X9E4 464 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
TDP1-217ENST00000557782 SLC34A3Q8N130 599 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms