RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RPH3AQ9Y2J0 694 aaPredicted RBP10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 C2orf72A6NCS6 295 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 LIPT2A6NK58 231 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 VSTM2BA6NLU5 285 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 UBE2CO00762 179 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 KNG1P01042 644 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 MT-ND4LP03901 98 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 OR8U9P0C7N5 309 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 SLC2A1P11166 492 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF121P58317 390 aaPredicted RBP10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 CLRN1P58418 232 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 DOK3Q7L591 496 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 GKN2Q86XP6 184 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 FAM89BQ8N5H3 189 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 PNLDC1Q8NA58 520 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 OR8U1Q8NH10 309 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 FNDC9Q8TBE3 224 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 LMX1AQ8TE12 382 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF251Q9BRH9 671 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 NUDT22Q9BRQ3 303 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 VDAC3Q9Y277 283 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 MYO9BQ13459 2157 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 A0A1W2PNV4 684 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 H3BMH7 237 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 PTGER4P35408 488 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 ARL4DP49703 201 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 PPT1P50897 306 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 SUMO3P55854 103 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 FAM3AP98173 230 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 ETV3LQ6ZN32 361 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 KDF1Q8NAX2 398 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 OR9K2Q8NGE7 335 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 LYPD6BQ8NI32 183 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 SECTM1Q8WVN6 248 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 TCEAL3Q969E4 200 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 MRPL13Q9BYD1 178 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 PLA2G2EQ9NZK7 142 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 SLCO1B1Q9Y6L6 691 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 A0A1W2PPC4 97 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 H3BML4 177 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 TSPAN15O95858 294 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 IFNA21P01568 189 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 CCL1P22362 96 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 ECI1P42126 302 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 ID4P47928 161 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 TMEM33P57088 247 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 GABREP78334 506 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 FOXF1Q12946 379 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 SLC16A13Q7RTY0 426 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 GALNTL5Q7Z4T8 443 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 LURAP1LQ8IV03 231 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 COMMD1Q8N668 190 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 MAFIPQ8WZ33 124 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 CYYR1Q96J86 154 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 PRRX2Q99811 253 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 TCEAL7Q9BRU2 100 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 VN1R1Q9GZP7 353 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 FAM212BQ9NTI7 297 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 GHRLQ9UBU3 117 aa10.42□□□□□ -0.74
VIPAS39-211ENST00000557658 DEDDO75618 318 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 IGHG1P01857 330 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 FABP1P07148 127 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF44P15621 663 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF17P17021 662 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 BLVRBP30043 206 aaPredicted RBP10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 AKR1C3P42330 323 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 RNF4P78317 190 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 HGFACQ04756 655 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 SPEM2Q0P670 501 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 ARL6IP1Q15041 203 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 UEVLDQ8IX04 471 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 NOXO1Q8NFA2 376 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 TMEM106CQ9BVX2 250 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 RGCCQ9H4X1 137 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 TUBD1Q9UJT1 453 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 STARD10Q9Y365 291 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 UNC80Q8N2C7 3258 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 SERPINE3A8MV23 424 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 LINC00587B1AMM8 73 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 CBR1P16152 277 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 AGAP20933 346 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF84P51523 738 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 FBXW4P57775 412 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 RBMS3Q6XE24 437 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 LANCL3Q6ZV70 420 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 SULF2Q8IWU5 870 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 SGPP2Q8IWX5 399 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF283Q8N7M2 679 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 UBAC2Q8NBM4 344 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 OR1L3Q8NH93 324 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 SSC4DQ8WTU2 575 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 PECRQ9BY49 303 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 SMIM3Q9BZL3 60 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 TUBA4BQ9H853 241 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 PLEKHA2Q9HB19 425 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF319Q9P2F9 582 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 B3GAT1Q9P2W7 334 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 ARID1AO14497 2285 aa10.41□□□□□ -0.74
VIPAS39-211ENST00000557658 FOXI3A8MTJ6 420 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms