RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 YARS2Q9Y2Z4 477 aaKnown RBP3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 PLCE1Q9P212 2302 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF532Q9HCE3 1301 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 TRAV6A0A075B6T7 132 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF816-ZNF321PA0A0X1KG74 233 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 C12orf77C9JDV5 145 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 SLC9A3R1O14745 358 aaPredicted RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 AGPAT2O15120 278 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 OR4Q2P0C623 313 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 CMA1P23946 247 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 OR1E1P30953 314 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 MDH2P40926 338 aaKnown RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 GPR4P46093 362 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 SUB1P53999 127 aaKnown RBP eCLIP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 YWHAEP62258 255 aaKnown RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF92Q03936 586 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF763Q0D2J5 394 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 TSC22D1Q15714 1073 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 TRMT5Q32P41 509 aaKnown RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 C1orf100Q5SVJ3 147 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF658Q5TYW1 1059 aaPredicted RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF620Q6ZNG0 422 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF497Q6ZNH5 498 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF547Q8IVP9 402 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 SYCE1Q8N0S2 351 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ARHGAP18Q8N392 663 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZADH2Q8N4Q0 377 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 OR10H4Q8NGA5 316 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 OR51S1Q8NGJ8 323 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 NUBPLQ8TB37 319 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 GTSF1Q8WW33 167 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ISOC2Q96AB3 205 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF599Q96NL3 588 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 NXF3Q9H4D5 531 aaKnown RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 APOBEC3BQ9UH17 382 aaKnown RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 BTNL2Q9UIR0 455 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 RCL1Q9Y2P8 373 aaKnown RBP3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 MYOFQ9NZM1 2061 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 FREM1Q5H8C1 2179 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.83
MTHFD1-216ENST00000557539 DNAH9Q9NYC9 4486 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 KMT2AQ03164 3969 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 PLPP1O14494 284 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 SCAMP2O15127 329 aaKnown RBP3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 SNAPINO95295 136 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 SEMG1P04279 462 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 FOLR2P14207 255 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 CCNOP22674 350 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 LCN1P31025 176 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 FMO3P31513 532 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 BTCP35070 178 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 TDGF1P3P51864 188 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 TNNC1P63316 161 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 TFF3Q07654 80 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 GGTLC2Q14390 218 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 GPR176Q14439 515 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 ALX1Q15699 326 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 KCTD19Q17RG1 926 aaPredicted RBP3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 GSG1Q2KHT4 349 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 PGGHGQ32M88 737 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 C6orf52Q5T4I8 152 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 ADAM5Q6NVV9 412 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 DEGS2Q6QHC5 323 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 CD300LGQ6UXG3 332 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 ASCL4Q6XD76 172 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 HSD17B13Q7Z5P4 300 aaPredicted RBP3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF677Q86XU0 584 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF440Q8IYI8 595 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 POM121L12Q8N7R1 296 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 FANK1Q8TC84 345 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 TMEM54Q969K7 222 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 EEF1AKMT3Q96AZ1 226 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 KIR2DL4Q99706 377 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 CTRCQ99895 268 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 EBF4Q9BQW3 602 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 RIOK2Q9BVS4 552 aaKnown RBP3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 HINT2Q9BX68 163 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 POLR2J2Q9GZM3 115 aaKnown RBP3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 NAA50Q9GZZ1 169 aaKnown RBP3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 POLR2J3Q9H1A7 115 aaKnown RBP3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 BOLA2Q9H3K6 86 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 PLEKHF2Q9H8W4 249 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 EML4Q9HC35 981 aaKnown RBP3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 TREM1Q9NP99 234 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF302Q9NR11 478 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 HCFC1P51610 2035 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 PTPRJQ12913 1337 aa3.64□□□□□ -1.83
MTHFD1-216ENST00000557539 PIKFYVEQ9Y2I7 2098 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 IGKV6D-21A0A0A0MT36 114 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 LYRM9A8MSI8 78 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 H7C0C1 242 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 AQP9O43315 295 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF354AO60765 605 aaPredicted RBP3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 SLC19A2O60779 497 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF780AO75290 641 aaPredicted RBP3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 ETHE1O95571 254 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 LSM8O95777 96 aaKnown RBP3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 IGHV3-48P01763 117 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms