RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DPAGT1Q9H3H5 408 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 HAO2Q9NYQ3 351 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 PDP1Q9P0J1 537 aaPredicted RBP13.09□□□□□ -0.31
TUBB3-213ENST00000557262 DUX4Q9UBX2 424 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 FAM96BQ9Y3D0 163 aa13.09□□□□□ -0.31
TUBB3-213ENST00000557262 ARRDC5A6NEK1 342 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 PRR23D1E9PI22 279 aaPredicted RBP13.08□□□□□ -0.32
TUBB3-213ENST00000557262 ACOT8O14734 319 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 GPR137BO60478 399 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 IGHV4-59P01825 116 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 LYNP07948 512 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 PRR23D2P0DMB1 279 aaPredicted RBP13.08□□□□□ -0.32
TUBB3-213ENST00000557262 AMY2BP19961 511 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 POU1F1P28069 291 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 DEFA6Q01524 100 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 GINS1Q14691 196 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 LRRC10Q5BKY1 277 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 METAP1DQ6UB28 335 aaPredicted RBP13.08□□□□□ -0.32
TUBB3-213ENST00000557262 CMTM4Q8IZR5 234 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 FAM216BQ8N7L0 139 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 OR5T2Q8NGG2 359 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 OR5P3Q8WZ94 311 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 CITED1Q99966 193 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 DNTTIP1Q9H147 329 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 ABCB9Q9NP78 766 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 ONECUT1Q9UBC0 465 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 CAB39Q9Y376 341 aaPredicted RBP13.08□□□□□ -0.32
TUBB3-213ENST00000557262 RNF114Q9Y508 228 aa13.08□□□□□ -0.32
TUBB3-213ENST00000557262 TMEM210A6NLX4 147 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 ZNF850A8MQ14 1090 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 GNGT2O14610 69 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 CST4P01036 141 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 HMGN1P05114 100 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 CALB2P22676 271 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 PRDX4Q13162 271 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 IKZF1Q13422 519 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 FAM76BQ5HYJ3 339 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 BRICD5Q6PL45 260 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 LINC01006Q8NI28 216 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 PIGCQ92535 297 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 RPL3LQ92901 407 aaKnown RBP13.07□□□□□ -0.32
TUBB3-213ENST00000557262 ASB9Q96DX5 294 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 MED30Q96HR3 178 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 RNF170Q96K19 258 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 CCT8L2Q96SF2 557 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 DCTN5Q9BTE1 182 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 NIPAL2Q9H841 368 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 DNAJB11Q9UBS4 358 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 ZNF391Q9UJN7 358 aa13.07□□□□□ -0.32
TUBB3-213ENST00000557262 PRODHO43272 600 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 SELENOFO60613 162 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 T-ENOLP0DO92 83 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 ACKR3P25106 362 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 GMFBP60983 142 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 GUCA2AQ02747 115 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 PDLIM3Q53GG5 364 aaPredicted RBP13.06□□□□□ -0.32
TUBB3-213ENST00000557262 STUMQ69YW2 141 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 GDPGP1Q6ZNW5 385 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 ZNF788Q6ZQV5 615 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 C1orf122Q6ZSJ8 110 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 KCTD8Q6ZWB6 473 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 TMEM179BQ7Z7N9 219 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 CPOQ8IVL8 374 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 C8orf46Q8TAG6 207 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 LRTOMTQ8WZ04 291 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 LYZL4Q96KX0 146 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 RAB3IPQ96QF0 476 aaPredicted RBP13.06□□□□□ -0.32
TUBB3-213ENST00000557262 HIST1H2AAQ96QV6 131 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 PKP2Q99959 881 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 WDR13Q9H1Z4 485 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
TUBB3-213ENST00000557262 TIMM23O14925 209 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 AKR7A2O43488 359 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 CLPXO76031 633 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 FBP1P09467 338 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 OSMP13725 252 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 EEF1B2P24534 225 aaKnown RBP13.05□□□□□ -0.32
TUBB3-213ENST00000557262 KRTAP10-3P60369 221 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 CDK5Q00535 292 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 SLC35D3Q5M8T2 416 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 ADGRG5Q8IZF4 528 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 Q8N7P7 452 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 ZSCAN4Q8NAM6 433 aaPredicted RBP13.05□□□□□ -0.32
TUBB3-213ENST00000557262 CANT1Q8WVQ1 401 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 H1FXQ92522 213 aaKnown RBP13.05□□□□□ -0.32
TUBB3-213ENST00000557262 C1orf21Q9H246 121 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 ZNF556Q9HAH1 456 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 SIRT7Q9NRC8 400 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 TAS2R1Q9NYW7 299 aa13.05□□□□□ -0.32
TUBB3-213ENST00000557262 NKX6-3A6NJ46 265 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 ACOD1A6NK06 481 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 AQP12BA6NM10 295 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 RNASEK-C17orf49H0YIS7 233 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 M0QZ24 198 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 NPFFO15130 113 aa13.04□□□□□ -0.32
TUBB3-213ENST00000557262 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-213ENST00000557262 HOXB6P17509 224 aaKnown RBP13.04□□□□□ -0.32
TUBB3-213ENST00000557262 ALOX5APP20292 161 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms