RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 NDUFA8P51970 172 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 STC1P52823 247 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 NKX2-5P52952 324 aaPredicted RBP3.79□□□□□ -1.8
VRK1-203ENST00000555067 PRR3P79522 188 aaKnown RBP3.79□□□□□ -1.8
VRK1-203ENST00000555067 SMARCB1Q12824 385 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 SGCAQ16586 387 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 IMPG1Q17R60 797 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 USP50Q70EL3 339 aaPredicted RBP3.79□□□□□ -1.8
VRK1-203ENST00000555067 BLIDQ8IZY5 108 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 GAPTQ8N292 157 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 SPICQ8N5J4 248 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 GPR26Q8NDV2 337 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 OR5M1Q8NGP8 315 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 ZFAND1Q8TCF1 268 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 GTSF1Q8WW33 167 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 RXFP2Q8WXD0 754 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 RGP1Q92546 391 aaPredicted RBP3.79□□□□□ -1.8
VRK1-203ENST00000555067 ZMYND19Q96E35 227 aaPredicted RBP3.79□□□□□ -1.8
VRK1-203ENST00000555067 AURKBQ96GD4 344 aaPredicted RBP3.79□□□□□ -1.8
VRK1-203ENST00000555067 FAM19A4Q96LR4 140 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 TMEM56Q96MV1 263 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 SIGLEC12Q96PQ1 595 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 GPR22Q99680 433 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 C9orf16Q9BUW7 83 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 SLC25A22Q9H936 323 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 ZNF702PQ9H963 129 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 PLGRKTQ9HBL7 147 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 SLCO1B3Q9NPD5 702 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 ZNF581Q9P0T4 197 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 PRO0461Q9UI25 63 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 VAX2Q9UIW0 290 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 SIGLEC9Q9Y336 463 aa3.79□□□□□ -1.8
VRK1-203ENST00000555067 MTCL1Q9Y4B5 1905 aaKnown RBP3.78□□□□□ -1.8
VRK1-203ENST00000555067 F5H768 121 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 H0Y980 276 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 H3BNH8 94 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 TNFSF13O75888 250 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 IFNA5P01569 189 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 IGKV1D-16P01601 117 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 IGHV3-23P01764 117 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 HLA-AP01891 365 aaKnown RBP3.78□□□□□ -1.8
VRK1-203ENST00000555067 CTXN2P0C2S0 81 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 SLC35G6P0C7Q6 338 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 RAB3BP20337 219 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 PVALBP20472 110 aaPredicted RBP3.78□□□□□ -1.8
VRK1-203ENST00000555067 FUT3P21217 361 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 RPA3P35244 121 aaPredicted RBP3.78□□□□□ -1.8
VRK1-203ENST00000555067 MDH2P40926 338 aaKnown RBP3.78□□□□□ -1.8
VRK1-203ENST00000555067 RAB38P57729 211 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 ARFRP1Q13795 201 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 OR1Q1Q15612 314 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 GUCA2BQ16661 112 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 ZNF630Q2M218 657 aaPredicted RBP3.78□□□□□ -1.8
VRK1-203ENST00000555067 TIMM50Q3ZCQ8 353 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 CHRFAM7AQ494W8 412 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 THOC7Q6I9Y2 204 aaKnown RBP3.78□□□□□ -1.8
VRK1-203ENST00000555067 CGB2Q6NT52 195 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 Q8N402 240 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 FAM71E2Q8N5Q1 922 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 TTLQ8NG68 377 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 OR4K17Q8NGC6 315 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 OR5L1Q8NGL2 311 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 ACTL9Q8TC94 416 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 SULT4A1Q9BR01 284 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 VCX3BQ9H321 246 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 METTL8Q9H825 291 aaKnown RBP3.78□□□□□ -1.8
VRK1-203ENST00000555067 EDA2RQ9HAV5 297 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 ABCB9Q9NP78 766 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 TMEM100Q9NV29 134 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 MARCH5Q9NX47 278 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 TAS2R9Q9NYW1 312 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 LRRC42Q9Y546 428 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 MTCH2Q9Y6C9 303 aa3.78□□□□□ -1.8
VRK1-203ENST00000555067 TRAV8-4A0A0B4J246 113 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 A0A0G2JN53 185 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 CENPBD1B2RD01 187 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 LRRN3E7EW58 273 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 M0QZ92 97 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 SLC16A4O15374 487 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 UPK1BO75841 260 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 RPP14O95059 124 aaKnown RBP3.77□□□□□ -1.81
VRK1-203ENST00000555067 PTHP01270 115 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 P01737 135 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 IFNA6P05013 189 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 RPS17P08708 135 aaKnown RBP3.77□□□□□ -1.81
VRK1-203ENST00000555067 HIST1H1CP16403 213 aaKnown RBP3.77□□□□□ -1.81
VRK1-203ENST00000555067 GTF2H1P32780 548 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 RPS9P46781 194 aaKnown RBP3.77□□□□□ -1.81
VRK1-203ENST00000555067 ZNF138P52744 262 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 CEBPGP53567 150 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 MTPNP58546 118 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 RAB8AP61006 207 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 MGAT3Q09327 533 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 MLLT11Q13015 90 aaPredicted RBP3.77□□□□□ -1.81
VRK1-203ENST00000555067 PRPSAP1Q14558 356 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 CEACAM21Q3KPI0 293 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 LRRC10Q5BKY1 277 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 CLVS2Q5SYC1 327 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 FAM45BPQ6NSW5 357 aa3.77□□□□□ -1.81
VRK1-203ENST00000555067 DNAJC24Q6P3W2 148 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms