RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 GNB1P62873 340 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 WDR38Q5JTN6 314 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 AKR7LQ8NHP1 331 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 CHST6Q9GZX3 395 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 MMP26Q9NRE1 261 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 C20orf141Q9NUB4 165 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 FBXO4Q9UKT5 387 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 CST4P01036 141 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 ZGLP1P0C6A0 271 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 SLC25A6P12236 298 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 OTPQ5XKR4 325 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 PTCRAQ6ISU1 281 aaPredicted RBP12.54□□□□□ -0.4
VTI1B-204ENST00000554659 SLC25A26Q70HW3 274 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 OR8D4Q8NGM9 314 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 BOD1Q96IK1 185 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 FABP4P15090 132 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 TMEM196Q5HYL7 178 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 C8orf82Q6P1X6 216 aaPredicted RBP12.54□□□□□ -0.4
VTI1B-204ENST00000554659 EVPLQ92817 2033 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 PINX1Q96BK5 328 aaKnown RBP12.54□□□□□ -0.4
VTI1B-204ENST00000554659 C8orf44Q96CB5 159 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 VAMP8Q9BV40 100 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 UCK1Q9HA47 277 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 PARD6AQ9NPB6 346 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 ZFPL1O95159 310 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 RRASP10301 218 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 TPPP2P59282 170 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 CXorf58Q96LI9 332 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 C4orf45Q96LM5 186 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 TBX21Q9UL17 535 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 TNRC6CQ9HCJ0 1690 aaKnown RBP12.54□□□□□ -0.4
VTI1B-204ENST00000554659 CXCL13O43927 109 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 KCNJ3P48549 501 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 GFERP55789 205 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 DRAM2Q6UX65 266 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF574Q6ZN55 896 aaPredicted RBP12.54□□□□□ -0.4
VTI1B-204ENST00000554659 PRRX2Q99811 253 aa12.54□□□□□ -0.4
VTI1B-204ENST00000554659 DNAJB12Q9NXW2 375 aaKnown RBP12.54□□□□□ -0.4
VTI1B-204ENST00000554659 GALR2O43603 387 aaPredicted RBP12.53□□□□□ -0.4
VTI1B-204ENST00000554659 MMP7P09237 267 aaPredicted RBP12.53□□□□□ -0.4
VTI1B-204ENST00000554659 GLB1P16278 677 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 HAAOP46952 286 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 ETFRF1Q6IPR1 90 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 TOMM20LQ6UXN7 152 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 IFI44Q8TCB0 444 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 EGLN1Q9GZT9 426 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 KLF13Q9Y2Y9 288 aaPredicted RBP12.53□□□□□ -0.4
VTI1B-204ENST00000554659 TMEM272A0A1B0GTI8 110 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 OR10D4PQ8NGN7 298 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 M1APQ8TC57 530 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 PHYHIPLQ96FC7 376 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 OR5V1Q9UGF6 321 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 RP1L1Q8IWN7 2480 aaPredicted RBP12.53□□□□□ -0.4
VTI1B-204ENST00000554659 INSL4Q14641 139 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
VTI1B-204ENST00000554659 UBAC2Q8NBM4 344 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 TAAR6Q96RI8 345 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 OR2J3O76001 311 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 FAHP16930 419 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 PMCHP20382 165 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 FGF7P21781 194 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
VTI1B-204ENST00000554659 XKRY2A2RUG3 117 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 GP1BAP07359 652 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 PLA1AQ53H76 456 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 OR52N4Q8NGI2 321 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 OR1N1Q8NGS0 311 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 IP6K3Q96PC2 410 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 NDFIP1Q9BT67 221 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 CTAG2O75638 210 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 GLRA1P23415 457 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 DHRS2Q13268 280 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 UBE3DQ7Z6J8 389 aa12.52□□□□□ -0.4
VTI1B-204ENST00000554659 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.41
VTI1B-204ENST00000554659 H3BP45 60 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 RTL8BQ17RB0 113 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF764Q96H86 408 aaPredicted RBP12.52□□□□□ -0.41
VTI1B-204ENST00000554659 C1QTNF6Q9BXI9 259 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 NXF2Q9GZY0 626 aaKnown RBP12.52□□□□□ -0.41
VTI1B-204ENST00000554659 FBXO34Q9NWN3 711 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 HMSDA8MTL9 139 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 CBR3O75828 277 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 GLULP15104 373 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF17P17021 662 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 CALCRP30988 508 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 CLDN15P56746 228 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 PJVKQ0ZLH3 352 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 DGAT2L6Q6ZPD8 337 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 NTNG2Q96CW9 530 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 SPTY2D1-AS1A0A0U1RR47 76 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 PMS2P1A4D2B8 440 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 FIGNL2A6NMB9 653 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 TNFSF11O14788 317 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 SLC6A1P30531 599 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 OR5I1Q13606 314 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms