RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 MBD2Q9UBB5 411 aa12.92□□□□□ -0.34
PPP4R3A-201ENST00000554308 DUX4Q9UBX2 424 aa12.92□□□□□ -0.34
PPP4R3A-201ENST00000554308 KLF2Q9Y5W3 355 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3A-201ENST00000554308 EEF1E1-BLOC1S5C9J1V9 151 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 H2BFMP0C1H6 154 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 GDF1P27539 372 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 CFPP27918 469 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 RAC1P63000 192 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 PLEKHN1Q494U1 663 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 OR6X1Q8NH79 312 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 ESRP2Q9H6T0 727 aaKnown RBP12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 FAM86C1Q9NVL1 165 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 NPIPA2E9PIF3 369 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 NPIPA3F8WFD2 350 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 SLC25A4P12235 298 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 ZBTB25P24278 435 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 CXADRP78310 365 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 ZNF345Q14585 488 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 CDNFQ49AH0 187 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 RAB12Q6IQ22 244 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 ADPRHL1Q8NDY3 354 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 PIGMQ9H3S5 423 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 MLXQ9UH92 298 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 CYB5R1Q9UHQ9 305 aa12.91□□□□□ -0.34
PPP4R3A-201ENST00000554308 OR14I1A6ND48 311 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 LRRC3CA6NJW4 275 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 OR2AT4A6NND4 320 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 H7C2Y5 167 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 TERTO14746 1132 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 SRD5A2P31213 254 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 HAGHLQ6PII5 290 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 OR4D6Q8NGJ1 314 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 ASB13Q8WXK3 278 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 NTNG2Q96CW9 530 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 SLAMF6Q96DU3 332 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 SLC17A5Q9NRA2 495 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 ASH2LQ9UBL3 628 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 DCHS1Q96JQ0 3298 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 EIF1BO60739 113 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 CD74P04233 296 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 CSNK2A1P68400 391 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 SSBP1Q04837 148 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 SRSF4Q08170 494 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 PCK2Q16822 640 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 FJX1Q86VR8 437 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 CATSPERDQ86XM0 798 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 OR5T2Q8NGG2 359 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 FAM46BQ96A09 425 aa12.9□□□□□ -0.34
PPP4R3A-201ENST00000554308 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.35
PPP4R3A-201ENST00000554308 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 MGAQ8IWI9 3026 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 MTRF1O75570 445 aaKnown RBP12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 NEURL1O76050 574 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 PGAM2P15259 253 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 VAMP1P23763 118 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 CARD18P57730 90 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 GABREP78334 506 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 SGCAQ16586 387 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 FDX2Q6P4F2 183 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 LYG2Q86SG7 212 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 ADGRE4PQ86SQ3 457 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR2AJ1Q8NGZ0 328 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 NUDCD2Q8WVJ2 157 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 ROBO4Q8WZ75 1007 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 SELENOIQ9C0D9 397 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 TLNRD1Q9H1K6 362 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 FN3KRPQ9HA64 309 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 LHFPL6Q9Y693 200 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 R4GMQ9 66 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 C13orf42A0A1B0GVH6 325 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 C9orf170A2RU37 121 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 HSPB2A8KAH6 182 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 LINC01387J3KSC0 135 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 RER1O15258 196 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 TLX3O43711 291 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 H2AFB1P0C5Y9 115 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 FTH1P19P0C7X4 201 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF17P17021 662 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 AKR1C4P17516 323 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 PRKXP51817 358 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 SUCLG1P53597 346 aaKnown RBP12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 HSPB2Q16082 182 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 ZNF584Q8IVC4 421 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 BHLHE23Q8NDY6 225 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 OR5AP2Q8NGF4 316 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 ADAMTS17Q8TE56 1095 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 RNF133Q8WVZ7 376 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 C12orf57Q99622 126 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 USB1Q9BQ65 265 aaKnown RBP12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 PRR13Q9NZ81 148 aa12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 GDF2Q9UK05 429 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-201ENST00000554308 ARID1AO14497 2285 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 SULT1C2O00338 296 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 LDLRAD4O15165 306 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 SLC2A1P11166 492 aa12.88□□□□□ -0.35
PPP4R3A-201ENST00000554308 IGFBP3P17936 291 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms