RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 A6NLC8 198 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 SHISA8B8ZZ34 492 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 MED6O75586 246 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 IFNA17P01571 189 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 ERCC1P07992 297 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 SPARCP09486 303 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 NUTF2P61970 127 aaKnown RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 BTNL8Q6UX41 500 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 ZNF383Q8NA42 475 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 TMEM14AQ9Y6G1 99 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 FREM3P0C091 2139 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 IGKV1D-43A0A0B4J1Z2 117 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 HSPB2A8KAH6 182 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 FAM157AC9JC47 383 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 MS4A18H0YCH9 400 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 EFSO43281 561 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 SNRNP70P08621 437 aaKnown RBP10.85□□□□□ -0.67
SHMT2-207ENST00000553837 HCKP08631 526 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 LPAR6P43657 344 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 GSK3AP49840 483 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 GABREP78334 506 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 FMODQ06828 376 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 PMPCAQ10713 525 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 HSPB2Q16082 182 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 MS4A18Q3C1V0 323 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 FDX2Q6P4F2 183 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 ANKRD37Q7Z713 158 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 TGIF2LXQ8IUE1 241 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 PRDM13Q9H4Q3 707 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 NCOR1P1Q9H4R4 102 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 RGCCQ9H4X1 137 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 FSCN3Q9NQT6 498 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 PARP11Q9NR21 331 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 COA3Q9Y2R0 106 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-207ENST00000553837 KCNIP3Q9Y2W7 256 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 FRYLO94915 3013 aa10.85□□□□□ -0.67
SHMT2-207ENST00000553837 ASCC3Q8N3C0 2202 aaKnown RBP10.85□□□□□ -0.67
SHMT2-207ENST00000553837 LOC100509620A0A075B734 347 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 LY6G6EA0A0G2JKS1 128 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 A0A1W2PPH5 198 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 C9JQL5 133 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 TAAR5O14804 337 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 STK17BO94768 372 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 AKR1C4P17516 323 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 NME2P22392 152 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 HTR2CP28335 458 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 S100A2P29034 98 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 CCKBRP32239 447 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 PHF19Q5T6S3 580 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 RHBDD2Q6NTF9 364 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 ADAM5Q6NVV9 412 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 PRSS54Q6PEW0 395 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 KMT5CQ86Y97 462 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 ZNF679Q8IYX0 411 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 RNF128Q8TEB7 428 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 AQP10Q96PS8 301 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 TGIF2Q9GZN2 237 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 OR2S2Q9NQN1 319 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 SUSD2Q9UGT4 822 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 KLK13Q9UKR3 277 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 U3KQA8 63 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 A0A087X0M5 115 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 A0A1B0GX30 115 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 A0A1W2PQM1 296 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 AGPAT2O15120 278 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 LRP3O75074 770 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 IGHMP01871 453 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 LYL1P12980 280 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 PAX1P15863 534 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 SULT1A2P50226 295 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 TAS2R31P59538 309 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 AWAT1Q58HT5 328 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 PYY3Q5JQD4 70 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 FAM69BQ5VUD6 431 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 LCN10Q6JVE6 187 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 GUSBP11Q6P575 273 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 C1QL4Q86Z23 238 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 OR4S1Q8NGB4 309 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 RAB24Q969Q5 203 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 S100PBPQ96BU1 408 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 ABHD6Q9BV23 337 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 TAF9BQ9HBM6 251 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 GTF2A1LQ9UNN4 478 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 TRIOBPQ9H2D6 2365 aa10.84□□□□□ -0.67
SHMT2-207ENST00000553837 IGLV3-12A0A075B6K2 115 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 hCG_1809904A0A1W2PP81 198 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 A0A1W2PR64 198 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 A0A1W2PRV1 198 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 H0YIZ8 118 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 EFNA2O43921 213 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 OR6A2O95222 327 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 AHSA1O95433 338 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 HOXB5P09067 269 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 HOXA5P20719 270 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 OR2B8PP59922 312 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 NHLH2Q02577 135 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 ROM1Q03395 351 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 HNF4GQ14541 408 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 NKAIN1Q4KMZ8 207 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 NCMAPQ5T1S8 102 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms