RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SPTSSAQ969W0 71 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 NABP1Q96AH0 204 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 MRGPRFQ96AM1 343 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 CMBLQ96DG6 245 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 WBP1Q96G27 269 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 CHST5Q9GZS9 411 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 OR10A2Q9H208 303 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 PROK2Q9HC23 129 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 SDHAF2Q9NX18 166 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF319Q9P2F9 582 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF391Q9UJN7 358 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 PCDHGA1Q9Y5H4 931 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 SPEGQ15772 3267 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 SPAARA0A1B0GVQ0 90 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 KANTRA0A1W2PQU2 76 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 DBX1A6NMT0 343 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 SRD5A2P31213 254 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 ECI1P42126 302 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 PTGFRP43088 359 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 OR3A4PP47883 348 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 CHAF1BQ13112 559 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 ENDOGQ14249 297 aaKnown RBP11.35□□□□□ -0.59
SHMT2-205ENST00000553474 SURF2Q15527 256 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-205ENST00000553474 SFRP5Q5T4F7 317 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 OR52W1Q6IF63 320 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 ALKAL2Q6UX46 152 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 ACOT7LQ6ZUV0 252 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 FAM122AQ96E09 287 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 TM2D1Q9BX74 207 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF224Q9NZL3 707 aa11.35□□□□□ -0.59
SHMT2-205ENST00000553474 MRPS18CQ9Y3D5 142 aaKnown RBP11.35□□□□□ -0.59
SHMT2-205ENST00000553474 OR2AT4A6NND4 320 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 CRTAPO75718 401 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-205ENST00000553474 CSN2P05814 226 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 SLC2A1P11166 492 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 CPT2P23786 658 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 NOVA1P51513 510 aaKnown RBP11.34□□□□□ -0.59
SHMT2-205ENST00000553474 PLAC9Q5JTB6 97 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 FAM209AQ5JX71 171 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 DRAM2Q6UX65 266 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 OVCH2Q7RTZ1 564 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 C20orf196Q8IYI0 205 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 GPR137CQ8N3F9 429 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM104Q8NE00 496 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 THAP6Q8TBB0 222 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 PPP1R1CQ8WVI7 109 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 HAS2Q92819 552 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 GNRHR2Q96P88 292 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 S100A13Q99584 98 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 NICN1Q9BSH3 213 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 REG4Q9BYZ8 158 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 ULBP2Q9BZM5 246 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 NMES1Q9C002 83 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 GPR132Q9UNW8 380 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 PIEZO1Q92508 2521 aa11.34□□□□□ -0.59
SHMT2-205ENST00000553474 COL27A1Q8IZC6 1860 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-205ENST00000553474 A0A0A6YYD4 124 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 IGKV1-9A0A0C4DH69 117 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 A8MXK9 166 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 M0R135 149 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 SOCS1O15524 211 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 BCL2L11O43521 198 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 FPR2P25090 351 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM50BP56557 158 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 MICBQ29980 383 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 RSPO4Q2I0M5 234 aaPredicted RBP11.33□□□□□ -0.59
SHMT2-205ENST00000553474 GFOD2Q3B7J2 385 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 PEG10Q86TG7 708 aaKnown RBP11.33□□□□□ -0.59
SHMT2-205ENST00000553474 OR5H2Q8NGV7 314 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 ST8SIA2Q92186 375 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 SPSB1Q96BD6 273 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF799Q96GE5 643 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 SPOCK3Q9BQ16 436 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 ZPBPQ9BS86 351 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 GLS2Q9UI32 602 aa11.33□□□□□ -0.59
SHMT2-205ENST00000553474 CFAP54Q96N23 3096 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 ZSCAN5BA6NJL1 495 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 FOXI3A8MTJ6 420 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-205ENST00000553474 WDPCPO95876 746 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 P04436 131 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 FGF2P09038 288 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 CST2P09228 141 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 FTH1P19P0C7X4 201 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 SLC6A9P48067 706 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 RAB35Q15286 201 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 JMJD6Q6NYC1 403 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-205ENST00000553474 INO80EQ8NBZ0 244 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-205ENST00000553474 COQ8AQ8NI60 647 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 LYZL4Q96KX0 146 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 ZNF385AQ96PM9 386 aaKnown RBP11.33□□□□□ -0.6
SHMT2-205ENST00000553474 PPA2Q9H2U2 334 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 NARFLQ9H6Q4 476 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 RAB18Q9NP72 206 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 SLC39A1Q9NY26 324 aa11.33□□□□□ -0.6
SHMT2-205ENST00000553474 TRBV6-7A0A0A0MS04 114 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 F5H5K5 113 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 LINC01387J3KSC0 135 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 CELA2AP08217 269 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 ZNF250P15622 560 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 VAMP1P23763 118 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms