RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 MAP6Q96JE9 813 aa12.29□□□□□ -0.44
CACNB3-220ENST00000551716 NSRP1Q9H0G5 558 aaKnown RBP12.29□□□□□ -0.44
CACNB3-220ENST00000551716 SP140LQ9H930 580 aa12.29□□□□□ -0.44
CACNB3-220ENST00000551716 TMEM210A6NLX4 147 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 ANXA2P2A6NMY6 339 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 OR2AT4A6NND4 320 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 CFL1P23528 166 aaKnown RBP12.28□□□□□ -0.44
CACNB3-220ENST00000551716 AZGP1P25311 298 aaKnown RBP12.28□□□□□ -0.44
CACNB3-220ENST00000551716 GABRA2P47869 451 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 ERVFRD-1P60508 538 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 GMFBP60983 142 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 MXRA7P84157 204 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 TAF13Q15543 124 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 LRRC23Q53EV4 343 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-220ENST00000551716 Q6ZS46 218 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 ZBTB46Q86UZ6 589 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 MRPL41Q8IXM3 137 aaKnown RBP12.28□□□□□ -0.44
CACNB3-220ENST00000551716 OR8J3Q8NGG0 315 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 WDR13Q9H1Z4 485 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 ABCB9Q9NP78 766 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 NLKQ9UBE8 527 aa12.28□□□□□ -0.44
CACNB3-220ENST00000551716 FFAR1O14842 300 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 LYL1P12980 280 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 COX7A1P24310 79 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 SLC25A1P53007 311 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 GP2P55259 537 aaKnown RBP12.27□□□□□ -0.45
CACNB3-220ENST00000551716 PLA1AQ53H76 456 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 WDR93Q6P2C0 686 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 CSNK2A3Q8NEV1 391 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 TMEM185AQ8NFB2 350 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 FAM46AQ96IP4 442 aaKnown RBP12.27□□□□□ -0.45
CACNB3-220ENST00000551716 AKR1E2Q96JD6 320 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 ERMAPQ96PL5 475 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-220ENST00000551716 NMNAT3Q96T66 252 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 KCNJ15Q99712 375 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 RTL8AQ9BWD3 113 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 PALMDQ9NP74 551 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 KRCC1Q9NPI7 259 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-220ENST00000551716 USE1Q9NZ43 259 aa12.27□□□□□ -0.45
CACNB3-220ENST00000551716 LSM4Q9Y4Z0 139 aaKnown RBP12.27□□□□□ -0.45
CACNB3-220ENST00000551716 J3KTA2 159 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 NPPAP01160 153 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 CAPZA1P52907 286 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 OR12D2P58182 307 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 RPL31P62899 125 aaKnown RBP12.26□□□□□ -0.45
CACNB3-220ENST00000551716 FAM3AP98173 230 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 SSX2Q16385 188 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 TIGD6Q17RP2 521 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 KHDC1LQ5JSQ8 128 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 NKAPLQ5M9Q1 402 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 AGBL2Q5U5Z8 902 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 SMARCD3Q6STE5 483 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 SLC16A9Q7RTY1 509 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 C16orf82Q7Z2V1 217 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 LHFPL4Q7Z7J7 247 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 CYP4Z1Q86W10 505 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 CALHM1Q8IU99 346 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 ZNRF1Q8ND25 227 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 OR52H1Q8NGJ2 320 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 OR13D1Q8NGV5 346 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 RSRC1Q96IZ7 334 aaKnown RBP12.26□□□□□ -0.45
CACNB3-220ENST00000551716 COPS4Q9BT78 406 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 KRTAP17-1Q9BYP8 105 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 RPRD1BQ9NQG5 326 aaKnown RBP12.26□□□□□ -0.45
CACNB3-220ENST00000551716 NKX1-2Q9UD57 310 aaPredicted RBP12.26□□□□□ -0.45
CACNB3-220ENST00000551716 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 MPC1Q9Y5U8 109 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 SNX13Q9Y5W8 968 aa12.26□□□□□ -0.45
CACNB3-220ENST00000551716 H0YHG0 523 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 ARPC3O15145 178 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 CCDC159P0C7I6 412 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 GLRA1P23415 457 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 SLC6A1P30531 599 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 FAM76BQ5HYJ3 339 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 TMEM200BQ69YZ2 307 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 DYNAPQ8N1N2 210 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 C11orf42Q8N5U0 333 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 CAPSLQ8WWF8 208 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 SDSLQ96GA7 329 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 PAPOLGQ9BWT3 736 aaKnown RBP12.25□□□□□ -0.45
CACNB3-220ENST00000551716 ELL3Q9HB65 397 aaPredicted RBP12.25□□□□□ -0.45
CACNB3-220ENST00000551716 C19orf12Q9NSK7 152 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 SACSQ9NZJ4 4579 aa12.25□□□□□ -0.45
CACNB3-220ENST00000551716 UNC119BA6NIH7 251 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 AKR7A2O43488 359 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 IDH3BO43837 385 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 ARG1P05089 322 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 SLC15A1P46059 708 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 PRKXP51817 358 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 KCTD18Q6PI47 426 aaPredicted RBP12.24□□□□□ -0.45
CACNB3-220ENST00000551716 ZDHHC21Q8IVQ6 265 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 OR4K13Q8NH42 304 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 STON2Q8WXE9 905 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 TFAP2CQ92754 450 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 RPL3LQ92901 407 aaKnown RBP12.24□□□□□ -0.45
CACNB3-220ENST00000551716 SGK3Q96BR1 496 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 REEP6Q96HR9 211 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 TMEM120AQ9BXJ8 343 aa12.24□□□□□ -0.45
CACNB3-220ENST00000551716 MRPL22Q9NWU5 206 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms