RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 J3QLI3 93 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 LGALS8O00214 317 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 P2RY10O00398 339 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 CST4P01036 141 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 DCTDP32321 178 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 MAP2K3P46734 347 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 GPM6AP51674 278 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 EGR3Q06889 387 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 LRRC36Q1X8D7 754 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 TP53I3Q53FA7 332 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 WDR82Q6UXN9 313 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 DCDC5Q6ZRR9 648 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 THAP5Q7Z6K1 395 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 PLPP7Q8NBV4 271 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 SEMA6DQ8NFY4 1073 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 HPSE2Q8WWQ2 592 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 C22orf15Q8WYQ4 148 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 RNF170Q96K19 258 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 RASSF4Q9H2L5 321 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 CTSZQ9UBR2 303 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 CLN8Q9UBY8 286 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 GNG8Q9UK08 70 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 MPC1Q9Y5U8 109 aa13.17□□□□□ -0.3
DDX54-205ENST00000548786 A8MXK9 166 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 ADAM20O43506 726 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 OR2T7P0C7T2 308 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 EPHA1P21709 976 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 PSMB10P40306 273 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 MTNR1AP48039 350 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 SNCBQ16143 134 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 PLCXD3Q63HM9 321 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 MOB3CQ70IA8 216 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 C1QL2Q7Z5L3 287 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 FAM90A1Q86YD7 464 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 OR2T27Q8NH04 317 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 HIST1H2AAQ96QV6 131 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 ACOXLQ9NUZ1 547 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDX54-205ENST00000548786 INSIG2Q9Y5U4 225 aa13.16□□□□□ -0.3
DDX54-205ENST00000548786 IGHV3OR16-10A0A075B7F0 116 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 TRAV38-1A0A0B4J264 116 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 A0A1B0GW55 424 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 METTL15A6NJ78 407 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 TFF1P04155 84 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 DUX4L2P0CJ85 424 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 DUX4L3P0CJ86 424 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 DUX4L4P0CJ87 422 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 DUX4L5P0CJ88 424 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 DUX4L6P0CJ89 424 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 DUX4L7P0CJ90 424 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 ZNF12P17014 697 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 GATA3P23771 443 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 SNRPGP62308 76 aaKnown RBP13.15□□□□□ -0.3
DDX54-205ENST00000548786 ZNF85Q03923 595 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 RIPPLY1Q0D2K3 151 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 KRTAP24-1Q3LI83 254 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 ARMCX4Q5H9R4 360 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 LIPNQ5VXI9 398 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 WDR25Q64LD2 544 aaPredicted RBP13.15□□□□□ -0.3
DDX54-205ENST00000548786 DUX4L9Q6RFH8 374 aaPredicted RBP13.15□□□□□ -0.3
DDX54-205ENST00000548786 ENTHD1Q8IYW4 607 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 ELMOD2Q8IZ81 293 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 SCCPDHQ8NBX0 429 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 OR5T2Q8NGG2 359 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 TRUB1Q8WWH5 349 aaKnown RBP13.15□□□□□ -0.3
DDX54-205ENST00000548786 MOB1AQ9H8S9 216 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 SMURF1Q9HCE7 757 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 GPR173Q9NS66 373 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 SNTG1Q9NSN8 517 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 DUX4Q9UBX2 424 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 SNX5Q9Y5X3 404 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 AUP1Q9Y679 476 aa13.15□□□□□ -0.3
DDX54-205ENST00000548786 IGHV2-70DA0A0C4DH43 119 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 ZNF732B4DXR9 585 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 E9PQ18 207 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 AKR7A2O43488 359 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 TCF21O43680 179 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 DHRS3O75911 302 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 LHBP01229 141 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 IGLV3-1P01715 115 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 TMED1Q13445 227 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 RCN1Q15293 331 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 KCNJ8Q15842 424 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 ZSCAN26Q16670 478 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 LPCAT4Q643R3 524 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 ZNF841Q6ZN19 808 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 FAM220AQ7Z4H9 259 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 PHC2Q8IXK0 858 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 FGFRL1Q8N441 504 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 NANPQ8TBE9 248 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 RORBQ92753 470 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 CCL13Q99616 98 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 SLC6A7Q99884 636 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 MRI1Q9BV20 369 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 WDR13Q9H1Z4 485 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 AMBNQ9NP70 447 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 FAM118AQ9NWS6 357 aa13.14□□□□□ -0.31
DDX54-205ENST00000548786 ENPP5Q9UJA9 477 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms