RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZNF454Q8N9F8 522 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 CSNK2A3Q8NEV1 391 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 OR8B12Q8NGG6 310 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 OR5P3Q8WZ94 311 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 PIGCQ92535 297 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 MICU1Q9BPX6 476 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 RGCCQ9H4X1 137 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 SNTG1Q9NSN8 517 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 ACOXLQ9NUZ1 547 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 C1RLQ9NZP8 487 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 MPC1Q9Y5U8 109 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 MGAM2Q2M2H8 2515 aa11□□□□□ -0.65
CPSF6-204ENST00000547486 PRODHO43272 600 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 KCNAB3O43448 404 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 E2F6O75461 281 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 DLX1P56177 255 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 IL5RAQ01344 420 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 PRB3Q04118 309 aaPredicted RBP10.99□□□□□ -0.65
CPSF6-204ENST00000547486 IKZF1Q13422 519 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 C11orf91Q3C1V1 193 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 CDONQ4KMG0 1287 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 DMRTC1Q5HYR2 192 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 ATPAF1Q5TC12 328 aaPredicted RBP10.99□□□□□ -0.65
CPSF6-204ENST00000547486 STUMQ69YW2 141 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 VMO1Q7Z5L0 202 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 KIR3DL3Q8N743 410 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 SCCPDHQ8NBX0 429 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 PAPD5Q8NDF8 572 aaKnown RBP10.99□□□□□ -0.65
CPSF6-204ENST00000547486 HPSE2Q8WWQ2 592 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 C12orf43Q96C57 262 aaKnown RBP10.99□□□□□ -0.65
CPSF6-204ENST00000547486 SLC7A6OSQ96CW6 309 aaPredicted RBP10.99□□□□□ -0.65
CPSF6-204ENST00000547486 RNF170Q96K19 258 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 FAM71F1Q96KD3 344 aaPredicted RBP10.99□□□□□ -0.65
CPSF6-204ENST00000547486 PKP2Q99959 881 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 SLITRK2Q9H156 845 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 ZNF556Q9HAH1 456 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 HAO2Q9NYQ3 351 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 TVP23BQ9NYZ1 205 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 KIF17Q9P2E2 1029 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 DNAJB9Q9UBS3 223 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 LRP12Q9Y561 859 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 MMP24Q9Y5R2 645 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 MEGF8Q7Z7M0 2845 aa10.99□□□□□ -0.65
CPSF6-204ENST00000547486 TCRBV3S1A0A5B6 114 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 PRR32B1ATL7 298 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 PSMD9O00233 223 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 GYG2O15488 501 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 FKBP6O75344 327 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 IGHV4-59P01825 116 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 ANXA8P13928 327 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 DCTDP32321 178 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 IER3P46695 156 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 RAG2P55895 527 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 PSMA6P60900 246 aaKnown RBP10.98□□□□□ -0.65
CPSF6-204ENST00000547486 RPS7P62081 194 aaKnown RBP10.98□□□□□ -0.65
CPSF6-204ENST00000547486 CBX1P83916 185 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 APOFQ13790 326 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 SLC35D3Q5M8T2 416 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 KRT74Q7RTS7 529 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 SLC36A1Q7Z2H8 476 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 SPATA24Q86W54 205 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 TMEM86BQ8N661 226 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 Q8N7P7 452 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 PPP1R14AQ96A00 147 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 RAB3IPQ96QF0 476 aaPredicted RBP10.98□□□□□ -0.65
CPSF6-204ENST00000547486 TEAD3Q99594 435 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 RTL8AQ9BWD3 113 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 SEMA6AQ9H2E6 1030 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 SLC25A19Q9HC21 320 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 ONECUT1Q9UBC0 465 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 DNAJB11Q9UBS4 358 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 KPTNQ9Y664 436 aa10.98□□□□□ -0.65
CPSF6-204ENST00000547486 CCDC182A6NF36 153 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 ANXA2P2A6NMY6 339 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 AKR7A2O43488 359 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 NDUFB3O43676 98 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 RHBDL1O75783 438 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 CRYBA1P05813 215 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 MRPL3P09001 348 aaKnown RBP10.97□□□□□ -0.65
CPSF6-204ENST00000547486 KRTAP10-3P60369 221 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 FLOT2Q14254 428 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 SNAPC1Q16533 368 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 DGUOKQ16854 277 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 ZNF788Q6ZQV5 615 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 KCTD8Q6ZWB6 473 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 TRPM8Q7Z2W7 1104 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 KRT77Q7Z794 578 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 FTMTQ8N4E7 242 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 OR10Z1Q8NGY1 313 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 ANGPTL6Q8NI99 470 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 SSMEM1Q8WWF3 244 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 GAFA1Q96PS6 74 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 DCTN5Q9BTE1 182 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 FAM206AQ9NX38 181 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 LAMP5Q9UJQ1 280 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 POMPQ9Y244 141 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 POMT1Q9Y6A1 747 aa10.97□□□□□ -0.65
CPSF6-204ENST00000547486 A0A1B0GVI7 797 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 TMEM269A0A1B0GVZ9 245 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 TMEM210A6NLX4 147 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms