RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	EXOSC4	Q9NPD3	245 aa	Known RBP	8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	UTP20	O75691	2785 aa	Known RBP	8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	TRBV5-5	A0A0J9YX44	114 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	FAM230A	A0A1W2PPH8	454 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545		A6NLC8	198 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	ZNF732	B4DXR9	585 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545		H7C417	338 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	OVOL3	O00110	214 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	MAGEB3	O15480	346 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	MLNR	O43193	412 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	CDC14B	O60729	498 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	CD36	P16671	472 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	JUNB	P17275	347 aa	Predicted RBP	8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	ATF1	P18846	271 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	TNFRSF1A	P19438	455 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	RAB3A	P20336	220 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	PRKACB	P22694	351 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	GABRA5	P31644	462 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	TGFBR2	P37173	567 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	GPM6A	P51674	278 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	EFNA4	P52798	201 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	GP2	P55259	537 aa	Known RBP	8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	RPS11	P62280	158 aa	Known RBP eCLIP	8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	INSL4	Q14641	139 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	CNN3	Q15417	329 aa	Known RBP	8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	CEACAM21	Q3KPI0	293 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	FAM209A	Q5JX71	171 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545		Q6ZSR3	168 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	CDH24	Q86UP0	819 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR13C9	Q8NGT0	318 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	TRMT10A	Q8TBZ6	339 aa	Known RBP	8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	ITLN1	Q8WWA0	313 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR5P3	Q8WZ94	311 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	ORAI1	Q96D31	301 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	MEGF10	Q96KG7	1140 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	SORCS2	Q96PQ0	1159 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR2V2	Q96R30	315 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	SAP30L	Q9HAJ7	183 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	NOX4	Q9NPH5	578 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	UFSP2	Q9NUQ7	469 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	BEX4	Q9NWD9	120 aa	Predicted RBP	8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	NDUFB11	Q9NX14	153 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	TAS2R4	Q9NYW5	299 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	IL19	Q9UHD0	177 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	SSR3	Q9UNL2	185 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	AKAP6	Q13023	2319 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	PLCE1	Q9P212	2302 aa		8.63	□□□□□ -1.03
CPSF7-221	ENST00000543545	SPG11	Q96JI7	2443 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	TRIM64C	A6NLI5	447 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	GABRP	O00591	440 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	SSX4	O60224	188 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	NDUFS7	O75251	213 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	LY6H	O94772	140 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	F12	P00748	615 aa	Predicted RBP	8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	HPX	P02790	462 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	CD55	P08174	381 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	ADH4	P08319	380 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	HCK	P08631	526 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	DAO	P14920	347 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	PTH2R	P49190	550 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	FUT6	P51993	359 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	GNG3	P63215	75 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	FABP5	Q01469	135 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	TESK1	Q15569	626 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	UBE2V2	Q15819	145 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	DEFB113	Q30KQ7	82 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	HSD17B12	Q53GQ0	312 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	PRAMEF6	Q5VXH4	476 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	TMEM42	Q69YG0	159 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	UTS2B	Q765I0	119 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	SATL1	Q86VE3	508 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	MOGAT3	Q86VF5	341 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	PARP16	Q8N5Y8	322 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR1M1	Q8NGA1	313 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR5A2	Q8NGI9	324 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	UBASH3B	Q8TF42	649 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	CCL17	Q92583	94 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	ITPKC	Q96DU7	683 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	BORCS8	Q96FH0	119 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	TECTB	Q96PL2	329 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	DERL3	Q96Q80	235 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	SLITRK2	Q9H156	845 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	BARX1	Q9HBU1	254 aa	Predicted RBP	8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	TCF7L1	Q9HCS4	588 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	TREM2	Q9NZC2	230 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	PPP1R3C	Q9UQK1	317 aa		8.62	□□□□□ -1.03
CPSF7-221	ENST00000543545	TRBV5-7	A0A0A0MS05	114 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	LOC100506127	A0A0U1RQW1	187 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	TRDV1	A0A1B0GX56	115 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	hCG_1807616	A0A1W2PRN6	198 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR5B21	A6NL26	309 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	TMEM210	A6NLX4	147 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	SULT1B1	O43704	296 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	ARL6IP5	O75915	188 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	NCR1	O76036	304 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	MAS1	P04201	325 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	IRF2	P14316	349 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	AZGP1	P25311	298 aa	Known RBP	8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	THBS2	P35442	1172 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	CD200	P41217	278 aa		8.61	□□□□□ -1.03

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms