RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FBXL17Q9UF56 701 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 ADAMTS9Q9P2N4 1935 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 A0A1W2PPH5 198 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 NUDT21O43809 227 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 MTRF1O75570 445 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 GIMD1P0DJR0 217 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 RPS2P15880 293 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 GABRR1P24046 479 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 ARL4DP49703 201 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR2B8PP59922 312 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 IAH1Q2TAA2 248 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 KRBOX4Q5JUW0 171 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 PRSS54Q6PEW0 395 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 ADAMTS17Q8TE56 1095 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 ASB13Q8WXK3 278 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 DAZLQ92904 295 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 CHRDQ9H2X0 955 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 LIME1Q9H400 295 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 KLHL13Q9P2N7 655 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 RPH3AQ9Y2J0 694 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 DIDO1Q9BTC0 2240 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 DHRS7CA6NNS2 312 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 ZNF878C9JN71 531 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 STMND1H3BQB6 276 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 MSTNO14793 375 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 SGCEO43556 437 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 CSTBP04080 98 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 HPNP05981 417 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 FAHP16930 419 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 ZNF708P17019 499 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 BLVRBP30043 206 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 OPRM1P35372 400 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 MYBPHQ13203 477 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 C10orf91Q5T1B1 145 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR1N1Q8NGS0 311 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 THRSPQ92748 146 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 MRPL24Q96A35 216 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 SH3BGRL3Q9H299 93 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 ATPIF1Q9UII2 106 aa9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 MCTS1Q9ULC4 181 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-207ENST00000540998 TRBV6-7A0A0A0MS04 114 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 IGHV3-15A0A0B4J1V0 119 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 TRAV20A0A0B4J274 112 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 F5H5K5 113 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 ANGPTL7O43827 346 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 DBHP09172 617 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 HKR1P10072 659 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 FBLP22087 321 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 CAV2P51636 162 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 ZNF616Q08AN1 781 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 PCK2Q16822 640 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 LRRC18Q8N456 261 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 POC1AQ8NBT0 407 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 SLC38A9Q8NBW4 561 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 TOMM40LQ969M1 308 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 ZNF285Q96NJ3 590 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 SEC11CQ9BY50 192 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 A0A0A6YYH2 397 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 TLCD2A6NGC4 264 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 A6NJ64 397 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 SHISA7A6NL88 538 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 H3BMH7 237 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 TXNL1O43396 289 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 ZNF44P15621 663 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 SLC6A9P48067 706 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 CX3CR1P49238 355 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 HGFACQ04756 655 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 CHAF1BQ13112 559 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 ZNF283Q8N7M2 679 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 APCDD1LQ8NCL9 501 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 GPHA2Q96T91 129 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 CDC6Q99741 560 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 CHST11Q9NPF2 352 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 DOCK7Q96N67 2140 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 CCDC163A0A0D9SF12 145 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 PNLIPP16233 465 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 SPINK2P20155 84 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 CLRN1P58418 232 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 RNF4P78317 190 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 IGSF11Q5DX21 431 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 CRIP3Q6Q6R5 217 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 RAB33BQ9H082 229 aa9.12□□□□□ -0.95
CDC42SE1-207ENST00000540998 A0A1W2PPC4 97 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 M0R036 132 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 MFNGO00587 321 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 FCGR3AP08637 254 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 NAT2P11245 290 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 FCGR2CP31995 323 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 TMEM33P57088 247 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 FXYD4P59646 89 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 FAM76BQ5HYJ3 339 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 PRAMEF20Q5VT98 475 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 GKN2Q86XP6 184 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 DTWD2Q8NBA8 298 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 HIST1H2BAQ96A08 127 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 PTX4Q96A99 478 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 KIRREL1Q96J84 757 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 LYZL4Q96KX0 146 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR5B2Q96R09 309 aa9.11□□□□□ -0.95
CDC42SE1-207ENST00000540998 KLRF1Q9NZS2 232 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms