RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 WDR86Q86TI4 376 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 NR2C2APQ86WQ0 139 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 DNAAF1Q8NEP3 725 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 OR51A2Q8NGJ7 313 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 OR13C3Q8NGS6 347 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 RAB2BQ8WUD1 216 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 TMEM203Q969S6 136 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 FBXW5Q969U6 566 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 TECTBQ96PL2 329 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 TRAF4Q9BUZ4 470 aaPredicted RBP8.98□□□□□ -0.97
VPS33A-204ENST00000540669 TLNRD1Q9H1K6 362 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 ZCCHC4Q9H5U6 513 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 PPP1R3EQ9H7J1 279 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 NOX4Q9NPH5 578 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 CISD1Q9NZ45 108 aaKnown RBP8.98□□□□□ -0.97
VPS33A-204ENST00000540669 PIGLQ9Y2B2 252 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 MPC1Q9Y5U8 109 aa8.98□□□□□ -0.97
VPS33A-204ENST00000540669 FLNBO75369 2602 aaKnown RBP8.97□□□□□ -0.97
VPS33A-204ENST00000540669 PQLC2LA1A4F0 135 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 DPPA5A6NC42 116 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 OVOL3O00110 214 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 AIREO43918 545 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 GMDSO60547 372 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 ARL6IP5O75915 188 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 ALDOBP05062 364 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 CD2P06729 351 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 SOD3P08294 240 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 MPZP25189 248 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 SERPINF1P36955 418 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 CD200P41217 278 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 GATA4P43694 442 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 SOX2P48431 317 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 MTNR1BP49286 362 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 PPOXP50336 477 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 FABP6P51161 128 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 CDH26Q8IXH8 852 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 TSEN15Q8WW01 171 aaKnown RBP8.97□□□□□ -0.97
VPS33A-204ENST00000540669 OR5P3Q8WZ94 311 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 GTF3AQ92664 365 aaKnown RBP8.97□□□□□ -0.97
VPS33A-204ENST00000540669 SPSB1Q96BD6 273 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 FGGYQ96C11 551 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 ISOC1Q96CN7 298 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 ORAI1Q96D31 301 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 LURAP1Q96LR2 239 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 C1orf147Q96MC9 270 aaPredicted RBP8.97□□□□□ -0.97
VPS33A-204ENST00000540669 SLC22A4Q9H015 551 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 ABCB9Q9NP78 766 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 NKIRAS2Q9NYR9 191 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 TAS2R4Q9NYW5 299 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 GPR160Q9UJ42 338 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 FZR1Q9UM11 496 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 ATP23Q9Y6H3 246 aa8.97□□□□□ -0.97
VPS33A-204ENST00000540669 IGKV1-27A0A075B6S5 117 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 OR5B21A6NL26 309 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 H3BMQ9 156 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 H7C417 338 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 SULT1B1O43704 296 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 DNASE1P24855 282 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 GCH1P30793 250 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 ZP1P60852 638 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 NCS1P62166 190 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 PRDX4Q13162 271 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 HSD17B12Q53GQ0 312 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 GPR107Q5VW38 600 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 C22orf42Q6IC83 251 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 C20orf204Q6ZNR8 217 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 CEACAM19Q7Z692 300 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 CDH24Q86UP0 819 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 SERPINA12Q8IW75 414 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 MUC15Q8N387 334 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 FTMTQ8N4E7 242 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 CELF2-AS1Q8N7Q2 184 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 OR1M1Q8NGA1 313 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 SYT3Q9BQG1 590 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 CHCHD6Q9BRQ6 235 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 ADAT1Q9BUB4 502 aaKnown RBP8.96□□□□□ -0.98
VPS33A-204ENST00000540669 RNF167Q9H6Y7 350 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 PLEKHA1Q9HB21 404 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 CYSLTR2Q9NS75 346 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 CBLN4Q9NTU7 201 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 FBXO9Q9UK97 447 aaPredicted RBP8.96□□□□□ -0.98
VPS33A-204ENST00000540669 N6AMT1Q9Y5N5 214 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.98
VPS33A-204ENST00000540669 VPS13CQ709C8 3753 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 GGT3PA6NGU5 568 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 C17orf100A8MU93 164 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 H3BSH0 61 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 M0R233 179 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 SLC22A1O15245 554 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 TIMM8AO60220 97 aaPredicted RBP8.95□□□□□ -0.98
VPS33A-204ENST00000540669 IGHV1-46P01743 117 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 PAX1P15863 534 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 ATF1P18846 271 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 AZGP1P25311 298 aaKnown RBP8.95□□□□□ -0.98
VPS33A-204ENST00000540669 THBS2P35442 1172 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 TGFBR1P36897 503 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 ALDH3B1P43353 468 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 MAB21L1Q13394 359 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 CEACAM21Q3KPI0 293 aa8.95□□□□□ -0.98
VPS33A-204ENST00000540669 FAM209AQ5JX71 171 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms