RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 BEND2Q8NDZ0 799 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 OR4Q3Q8NH05 313 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 FAM110DQ8TAY7 271 aaPredicted RBP9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 SEH1LQ96EE3 360 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 INTS14Q96SY0 518 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 CDRT15Q96T59 188 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 ELAC2Q9BQ52 826 aaKnown RBP9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 ABHD6Q9BV23 337 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 METTL8Q9H825 291 aaKnown RBP9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 MED4Q9NPJ6 270 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 DNAJB11Q9UBS4 358 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 RHBDD3Q9Y3P4 386 aa9.83□□□□□ -0.84
CBX3P4-202ENST00000540428 MEIOCA2RUB1 952 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 RIIAD1A6NNX1 92 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 SIGLEC5O15389 551 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 CST4P01036 141 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 CLUP10909 449 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 GSTT1P30711 240 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 SAA4P35542 130 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 MSX2P35548 267 aaPredicted RBP9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 OPRL1P41146 370 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 KLRD1Q13241 179 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 BLMHQ13867 455 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 HERPUD1Q15011 391 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 SLC35E4Q6ICL7 350 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 C1QL4Q86Z23 238 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 AQP11Q8NBQ7 271 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 OR5T2Q8NGG2 359 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 OR6N2Q8NGY6 317 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 ANGPTL6Q8NI99 470 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 OR5P3Q8WZ94 311 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 H1FXQ92522 213 aaKnown RBP9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 PGAM5Q96HS1 289 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 GAFA1Q96PS6 74 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 DGCR6LQ9BY27 220 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 FAM234AQ9H0X4 552 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 PPP1R3EQ9H7J1 279 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 CMC2Q9NRP2 79 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 ZNF446Q9NWS9 450 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 NDE1Q9NXR1 346 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 ZNF319Q9P2F9 582 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 SLC25A10Q9UBX3 287 aaPredicted RBP9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 ZNF391Q9UJN7 358 aa9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 SF3B6Q9Y3B4 125 aaKnown RBP9.82□□□□□ -0.84
CBX3P4-202ENST00000540428 GLCEO94923 617 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 ACAA1P09110 424 aaPredicted RBP9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 H2BFMP0C1H6 154 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 SELLP14151 372 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 GABRA5P31644 462 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 KIR2DS4P43632 304 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 PRDX4Q13162 271 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 AANATQ16613 207 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 DGUOKQ16854 277 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 MICAQ29983 383 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 GFOD2Q3B7J2 385 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 FBLN7Q53RD9 439 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 C16orf89Q6UX73 402 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 Q6ZTK2 550 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 KRT74Q7RTS7 529 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 ERI1Q8IV48 349 aaKnown RBP9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 DTX3Q8N9I9 347 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 PAPD5Q8NDF8 572 aaKnown RBP9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 OR5D13Q8NGL4 314 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 RPL3LQ92901 407 aaKnown RBP9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 ITFG2Q969R8 447 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 WDR13Q9H1Z4 485 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 PPA2Q9H2U2 334 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 MAGIXQ9H6Y5 334 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 RAB18Q9NP72 206 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 SNTG1Q9NSN8 517 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 ARMC1Q9NVT9 282 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 DNAJC27Q9NZQ0 273 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 ACTR3BQ9P1U1 418 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 NLKQ9UBE8 527 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 MAB21L2Q9Y586 359 aa9.81□□□□□ -0.84
CBX3P4-202ENST00000540428 TRBV23-1A0A0A0MS06 115 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 A0A1W2PQ09 198 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 A0A1W2PRD5 423 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 A0A1W2PRF3 423 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 A0A1W2PRM7 423 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 ZNF850A8MQ14 1090 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 SNX3O60493 162 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 SOX14O95416 240 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 OPN1MWP04001 364 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 OPN1MW2P0DN77 364 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 OPN1MW3P0DN78 364 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 NDUFB7P17568 137 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 ACKR3P25106 362 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 DCTDP32321 178 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 EFNB2P52799 333 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 DLX1P56177 255 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 PRB3Q04118 309 aaPredicted RBP9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 GK3PQ14409 553 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 KPRPQ5T749 579 aaPredicted RBP9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 CD300LDQ6UXZ3 194 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 KCTD8Q6ZWB6 473 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 CPLX4Q7Z7G2 160 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 TIGD4Q8IY51 512 aa9.8□□□□□ -0.84
CBX3P4-202ENST00000540428 ZDHHC23Q8IYP9 409 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms