RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SGPP1Q9BX95 441 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 SLCO5A1Q9H2Y9 848 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 SEPSECSQ9HD40 501 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 VAX2Q9UIW0 290 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 TRAV27A0A087WT01 109 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 A0A0U1RQV5 110 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 LOC100289279A0A1B0GTE1 492 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 A0A1B0GW64 132 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 MED19A0JLT2 244 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 C10orf142B7Z368 130 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 H3BSH0 61 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 RPP14O95059 124 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 LCATP04180 440 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 GABRA4P48169 554 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 LRP11Q86VZ4 500 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF584Q8IVC4 421 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 KLHDC8AQ8IYD2 350 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF100Q8IYN0 542 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF679Q8IYX0 411 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 OR51A7Q8NH64 312 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 OR10C1Q96KK4 312 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 PRSS27Q9BQR3 290 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 APOOQ9BUR5 198 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 CDH20Q9HBT6 801 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC17A5Q9NRA2 495 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 KLHL28Q9NXS3 571 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 PRR13Q9NZ81 148 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 SIGLEC7Q9Y286 467 aa8.42□□□□□ -1.06
CTNNA1-243ENST00000540387 MDC1Q14676 2089 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PLXNA2O75051 1894 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 TRBV5-5A0A0J9YX44 114 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ELOA3DA6NLF2 546 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PRR32B1ATL7 298 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 HPRT1P00492 218 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PET100P0DJ07 73 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 SERPINA2P20848 420 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 HNRNPA2B1P22626 353 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 FCGR2CP31995 323 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PRLHRP49683 370 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 NOVA1P51513 510 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ELLP55199 621 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 KLF3P57682 345 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 KIAA0895LQ68EN5 471 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 OR4C11Q6IEV9 310 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 OPN5Q6U736 354 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF429Q86V71 674 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 GCNT2Q8N0V5 402 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 FAM174AQ8TBP5 190 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 CCDC74AQ96AQ1 378 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PRAP1Q96NZ9 151 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 LMF1Q96S06 567 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 EFCAB11Q9BUY7 163 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 OR11A1Q9GZK7 315 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PHPT1Q9NRX4 125 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 TM7SF3Q9NS93 570 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF107Q9UII5 783 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 SH3BGRL2Q9UJC5 107 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 TCFL5Q9UL49 500 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ABCA7Q8IZY2 2146 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 FTCDNL1E5RQL4 147 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PLPP1O14494 284 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 XKRYO14609 159 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 DOK2O60496 412 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 TBX19O60806 448 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 SCGB1D1O95968 90 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 CYB5R3P00387 301 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 IGHEP01854 428 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PPBPP02775 128 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PRH1P02810 166 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 FUT3P21217 361 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 RPL12P30050 165 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 GRPRP30550 384 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 CHRNB4P30926 498 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 COL10A1Q03692 680 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 SPEM2Q0P670 501 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 PMS2P11Q13670 270 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 NKAIN1Q4KMZ8 207 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 COL5A1-AS1Q5SY13 56 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 C1orf185Q5T7R7 199 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC25A26Q70HW3 274 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 MRPL41Q8IXM3 137 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 MAML2Q8IZL2 1156 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 OR52E2Q8NGJ4 325 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 OR51A2Q8NGJ7 313 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 OR1L6Q8NGR2 347 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNRF4Q8WWF5 429 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 METTL21AQ8WXB1 218 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 DNASE2BQ8WZ79 361 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 TSLPQ969D9 159 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 TVP23CQ96ET8 276 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 C16orf58Q96GQ5 468 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 GLIPR2Q9H4G4 154 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 SMDT1Q9H4I9 107 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 RAB18Q9NP72 206 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 DKKL1Q9UK85 242 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms