RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 IL5RAQ01344 420 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 IKZF1Q13422 519 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 SNCBQ16143 134 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 TAF9Q16594 264 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 ATPAF1Q5TC12 328 aaPredicted RBP10.28□□□□□ -0.76
VAMP1-206ENST00000538970 GDPGP1Q6ZNW5 385 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 SHFQ7M4L6 423 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 DHFR2Q86XF0 187 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 ARHGAP24Q8N264 748 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 FTMTQ8N4E7 242 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 C8orf46Q8TAG6 207 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 LRTOMTQ8WZ04 291 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 PGAM5Q96HS1 289 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 MICU1Q9BPX6 476 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 RTL8AQ9BWD3 113 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 MMP27Q9H306 513 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 DPAGT1Q9H3H5 408 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 BRD7Q9NPI1 651 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 SIRT7Q9NRC8 400 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 ZNRD1Q9P1U0 126 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 MPC1Q9Y5U8 109 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 TMEM210A6NLX4 147 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 RNASEK-C17orf49H0YIS7 233 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 H3BN98 237 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 TIMM23O14925 209 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 CST4P01036 141 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 LYNP07948 512 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 FBP1P09467 338 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 ACKR3P25106 362 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 GNGT1P63211 74 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 PRB3Q04118 309 aaPredicted RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 PRDX4Q13162 271 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 TRIM25Q14258 630 aaKnown RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 GK3PQ14409 553 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 FAM98BQ52LJ0 330 aaKnown RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 LRRC10Q5BKY1 277 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 ASPHD2Q6ICH7 369 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 Q6ZSV7 163 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 CMTM4Q8IZR5 234 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 Q8N7P7 452 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 ZSCAN4Q8NAM6 433 aaPredicted RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 OR5T2Q8NGG2 359 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 OR10Z1Q8NGY1 313 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 OTOSQ8NHW6 89 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 NPRL2Q8WTW4 380 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 HPSE2Q8WWQ2 592 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 OR5P3Q8WZ94 311 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 RPL3LQ92901 407 aaKnown RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 OTULINQ96BN8 352 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 RAB3IPQ96QF0 476 aaPredicted RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 FEVQ99581 238 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 PKP2Q99959 881 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 RBM4BQ9BQ04 359 aaKnown RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 FGF23Q9GZV9 251 aaPredicted RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 DNTTIP1Q9H147 329 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 WDR13Q9H1Z4 485 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 ABCB9Q9NP78 766 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 HAO2Q9NYQ3 351 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 VPREB3Q9UKI3 123 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 CAB39Q9Y376 341 aaPredicted RBP10.27□□□□□ -0.77
VAMP1-206ENST00000538970 FAM96BQ9Y3D0 163 aa10.27□□□□□ -0.77
VAMP1-206ENST00000538970 ARRDC5A6NEK1 342 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 NKX6-3A6NJ46 265 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 ZNF850A8MQ14 1090 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 B2RBV5 119 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 NPFFO15130 113 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 SELENOFO60613 162 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 TFF1P04155 84 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 PAICSP22234 425 aaKnown RBP10.26□□□□□ -0.77
VAMP1-206ENST00000538970 GYS2P54840 703 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 DLX1P56177 255 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 PSMA6P60900 246 aaKnown RBP10.26□□□□□ -0.77
VAMP1-206ENST00000538970 GMFBP60983 142 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 MS4A2Q01362 244 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 GUCA2AQ02747 115 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 KLRD1Q13241 179 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 DGUOKQ16854 277 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 FAM76BQ5HYJ3 339 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 ZNF788Q6ZQV5 615 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 ZNF454Q8N9F8 522 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 ANGPTL6Q8NI99 470 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 H1FXQ92522 213 aaKnown RBP10.26□□□□□ -0.77
VAMP1-206ENST00000538970 TNFRSF14Q92956 283 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 LYZL4Q96KX0 146 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 GAFA1Q96PS6 74 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 OR51V1Q9H2C8 321 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 C16orf95Q9H693 158 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 SNTG1Q9NSN8 517 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 DNAJB11Q9UBS4 358 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 KLHDC2Q9Y2U9 406 aa10.26□□□□□ -0.77
VAMP1-206ENST00000538970 BTBD17A6NE02 478 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 PRR23D1E9PI22 279 aaPredicted RBP10.25□□□□□ -0.77
VAMP1-206ENST00000538970 SIGLEC5O15389 551 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 AKR7A2O43488 359 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 PRR23D2P0DMB1 279 aaPredicted RBP10.25□□□□□ -0.77
VAMP1-206ENST00000538970 RAP2AP10114 183 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 EEF1B2P24534 225 aaKnown RBP10.25□□□□□ -0.77
VAMP1-206ENST00000538970 DCTDP32321 178 aa10.25□□□□□ -0.77
VAMP1-206ENST00000538970 DHRS7BQ6IAN0 325 aaPredicted RBP10.25□□□□□ -0.77
VAMP1-206ENST00000538970 PLBD1Q6P4A8 553 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms