RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 IGKV1D-43A0A0B4J1Z2 117 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 A0A1W2PQ09 198 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 IRGMA1A4Y4 181 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 MEIOCA2RUB1 952 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TVP23AA6NH52 213 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 ZNF670-ZNF695F2Z2N8 137 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 MYL12BO14950 172 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 RGS5O15539 181 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 SSX4O60224 188 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 KALRNO60229 2985 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 DOK2O60496 412 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 GLCEO94923 617 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 GOSR1O95249 250 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 MPZL1O95297 269 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 IL1AP01583 271 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 CRYAAP02489 173 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 CST2P09228 141 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 CLUP10909 449 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 CBR1P16152 277 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 MYL9P24844 172 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 PTAFRP25105 342 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 STOMP27105 288 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TNFSF8P32971 234 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 APLNRP35414 380 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 NAA10P41227 235 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-208ENST00000538266 RFX2P48378 723 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 CDH11P55287 796 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 SNRPGP62308 76 aaKnown RBP3.72□□□□□ -1.81
SNHG1-208ENST00000538266 LSM6P62312 80 aaKnown RBP3.72□□□□□ -1.81
SNHG1-208ENST00000538266 GALK2Q01415 458 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 BSPH1Q075Z2 132 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 MED22Q15528 200 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TAF13Q15543 124 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 ETFDHQ16134 617 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TBC1D28Q2M2D7 210 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 DDI2Q5TDH0 399 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 RNLSQ5VYX0 342 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 NXNL2Q5VZ03 156 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TRIQKQ629K1 86 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 MZT2BQ6NZ67 158 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 ARL9Q6T311 187 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 SLC22A25Q6T423 547 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 UNQ6126/PRO20091Q6UXV3 157 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 FOXL2NBQ6ZUU3 175 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 NRARPQ7Z6K4 114 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 MDP1Q86V88 176 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TMEM200AQ86VY9 491 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 SKA3Q8IX90 412 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TCTE3Q8IZS6 198 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 GDPD1Q8N9F7 314 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 BBS1Q8NFJ9 593 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 GJC3Q8NFK1 279 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 OR1J2Q8NGS2 313 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 OR6N2Q8NGY6 317 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 ANGPTL6Q8NI99 470 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 ENKURQ8TC29 256 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 ABHD5Q8WTS1 349 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 C11orf40Q8WZ69 217 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 SLC7A6Q92536 515 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 AP3S1Q92572 193 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 NABP1Q96AH0 204 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 ZMYND19Q96E35 227 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-208ENST00000538266 RADILQ96JH8 1075 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 SDHCQ99643 169 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-208ENST00000538266 WACQ9BTA9 647 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TRAF4Q9BUZ4 470 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-208ENST00000538266 ZNF416Q9BWM5 594 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 HCAR1Q9BXC0 346 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 C1QTNF6Q9BXI9 259 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 GON7Q9BXV9 100 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 NMNAT2Q9BZQ4 307 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 SRRQ9GZT4 340 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 HDHD2Q9H0R4 259 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 C1orf198Q9H425 327 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 RNF167Q9H6Y7 350 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 NIPAL2Q9H841 368 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 CDH20Q9HBT6 801 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 TRIM36Q9NQ86 728 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 PLEK2Q9NYT0 353 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 SSR3Q9UNL2 185 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 LSM2Q9Y333 95 aaKnown RBP3.72□□□□□ -1.81
SNHG1-208ENST00000538266 RPL36Q9Y3U8 105 aaKnown RBP3.72□□□□□ -1.81
SNHG1-208ENST00000538266 RNF115Q9Y4L5 304 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 V9GYH0 126 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 LAMA5O15230 3695 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 CFAP46Q8IYW2 2715 aa3.72□□□□□ -1.81
SNHG1-208ENST00000538266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-208ENST00000538266 C5orf49A4QMS7 147 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 OR6C6A6NF89 314 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 A6NNC1 897 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 A8MV72 311 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-208ENST00000538266 DEFB108AA8MXU0 73 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF593O00488 134 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-208ENST00000538266 ABCD4O14678 606 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 RER1O15258 196 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 SGCEO43556 437 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 SPRY2O43597 315 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 SELENOFO60613 162 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 GPX5O75715 221 aa3.71□□□□□ -1.82
SNHG1-208ENST00000538266 IGKV3-15P01624 115 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms