RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PCGF1Q9BSM1 259 aa19.43■□□□□ 0.7
SMPD1-209ENST00000533196 DNTTIP1Q9H147 329 aa19.43■□□□□ 0.7
SMPD1-209ENST00000533196 NOX4Q9NPH5 578 aa19.43■□□□□ 0.7
SMPD1-209ENST00000533196 ENOPH1Q9UHY7 261 aa19.43■□□□□ 0.7
SMPD1-209ENST00000533196 CCDC182A6NF36 153 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 ZNF850A8MQ14 1090 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 TOX4O94842 621 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 MMP9P14780 707 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 MAP2K3P46734 347 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 PDCD1Q15116 288 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 ATP6AP1Q15904 470 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 ATPAF1Q5TC12 328 aaPredicted RBP19.42■□□□□ 0.7
SMPD1-209ENST00000533196 BTN2A1Q7KYR7 527 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 ZDHHC23Q8IYP9 409 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 ZNF679Q8IYX0 411 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 PIGCQ92535 297 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 WDFY2Q96P53 400 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 DUX5Q96PT3 197 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 HIST1H2AAQ96QV6 131 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 MNTQ99583 582 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 RASSF4Q9H2L5 321 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 KRT84Q9NSB2 600 aa19.42■□□□□ 0.7
SMPD1-209ENST00000533196 IGHV3OR15-7A0A075B7D8 119 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 ZNF816-ZNF321PA0A0X1KG74 233 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 TMEM269A0A1B0GVZ9 245 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.41■□□□□ 0.7
SMPD1-209ENST00000533196 FAM81AQ8TBF8 368 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 OR8B4Q96RC9 309 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 TBX15Q96SF7 602 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 PKP2Q99959 881 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 SIRPDQ9H106 197 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 PPP1R3EQ9H7J1 279 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 FAM206AQ9NX38 181 aa19.41■□□□□ 0.7
SMPD1-209ENST00000533196 SLC22A31A6NKX4 558 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 G3V2T6 193 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 PRKYO43930 277 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 FASP25445 335 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 HCCSP53701 268 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 ZNF829Q3KNS6 432 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-209ENST00000533196 WDR38Q5JTN6 314 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 ZBTB37Q5TC79 503 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 SLX4IPQ5VYV7 408 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 NXNL2Q5VZ03 156 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 BRD3OSQ6XYD6 125 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 GATAD2BQ8WXI9 593 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 ST8SIA4Q92187 359 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 ZDHHC16Q969W1 377 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 DUS3LQ96G46 650 aaKnown RBP19.4■□□□□ 0.7
SMPD1-209ENST00000533196 RNF170Q96K19 258 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 FAM71F1Q96KD3 344 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-209ENST00000533196 CNN2Q99439 309 aaKnown RBP19.4■□□□□ 0.7
SMPD1-209ENST00000533196 ZNF747Q9BV97 191 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 GABARAPL1Q9H0R8 117 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 HAO2Q9NYQ3 351 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 H2AFY2Q9P0M6 372 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-209ENST00000533196 RPUSD1Q9UJJ7 312 aaKnown RBP19.4■□□□□ 0.7
SMPD1-209ENST00000533196 KPTNQ9Y664 436 aa19.4■□□□□ 0.7
SMPD1-209ENST00000533196 FCN3O75636 299 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 MRPL3P09001 348 aaKnown RBP19.39■□□□□ 0.69
SMPD1-209ENST00000533196 FCGR1AP12314 374 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 TGM4P49221 684 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 RIDAP52758 137 aaKnown RBP19.39■□□□□ 0.69
SMPD1-209ENST00000533196 ACTR3P61158 418 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 IL13RA1P78552 427 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 EFNB1P98172 346 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 POU4F2Q12837 409 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 DEFB112Q30KQ8 113 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 KDM4DQ6B0I6 523 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 C16orf87Q6PH81 154 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 MEPCEQ7L2J0 689 aaKnown RBP19.39■□□□□ 0.69
SMPD1-209ENST00000533196 ZDHHC13Q8IUH4 622 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 TMEM86BQ8N661 226 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 SCCPDHQ8NBX0 429 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 HPSE2Q8WWQ2 592 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 RAB3IPQ96QF0 476 aaPredicted RBP19.39■□□□□ 0.69
SMPD1-209ENST00000533196 CCL13Q99616 98 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 PBOV1Q9GZY1 135 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 CNTD2Q9H8S5 307 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 NUFIP1Q9UHK0 495 aaKnown RBP19.39■□□□□ 0.69
SMPD1-209ENST00000533196 AP4S1Q9Y587 144 aa19.39■□□□□ 0.69
SMPD1-209ENST00000533196 SOX21Q9Y651 276 aaPredicted RBP19.39■□□□□ 0.69
SMPD1-209ENST00000533196 CENPVL3A0A0U1RRI6 287 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 ZAR1LA6NP61 321 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 NDUFB3O43676 98 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 IGLV3-1P01715 115 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 SFTPBP07988 381 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 GNG3P63215 75 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 LRRC10Q5BKY1 277 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 STUMQ69YW2 141 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 KCTD8Q6ZWB6 473 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 LY6G5BQ8NDX9 201 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 TMEM163Q8TC26 289 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 RPL3LQ92901 407 aaKnown RBP19.38■□□□□ 0.69
SMPD1-209ENST00000533196 MOB1AQ9H8S9 216 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 DNAJB11Q9UBS4 358 aa19.38■□□□□ 0.69
SMPD1-209ENST00000533196 NKX6-3A6NJ46 265 aa19.37■□□□□ 0.69
SMPD1-209ENST00000533196 POM121CA8CG34 1229 aa19.37■□□□□ 0.69
SMPD1-209ENST00000533196 ARF6P62330 175 aa19.37■□□□□ 0.69
SMPD1-209ENST00000533196 RIPPLY1Q0D2K3 151 aa19.37■□□□□ 0.69
SMPD1-209ENST00000533196 CEACAM21Q3KPI0 293 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms