RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 USP3Q9Y6I4 520 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 PRSS2P07478 247 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 NTSR1P30989 418 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 MFAP4P55083 255 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 UBE2L3P68036 154 aaKnown RBP7.36□□□□□ -1.23
CTNND1-231ENST00000532463 C19orf57Q0VDD7 668 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 ZNF506Q5JVG8 444 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 FCRL6Q6DN72 434 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 H1FNTQ75WM6 255 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-231ENST00000532463 CCDC190Q86UF4 302 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 LRRTM3Q86VH5 581 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 TMEM178AQ8NBL3 297 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 PIK3IP1Q96FE7 263 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 C12orf42Q96LP6 360 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 HHIPQ96QV1 700 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 TMEM38BQ9NVV0 291 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 PGPEP1Q9NXJ5 209 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 CLEC2DQ9UHP7 191 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 TIMM10BQ9Y5J6 103 aa7.36□□□□□ -1.23
CTNND1-231ENST00000532463 MYO10Q9HD67 2058 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 A0A0U1RQF3 1178 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 SNURFLB1AK76 121 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 CA12O43570 354 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 HBZP02008 142 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 HLA-GP17693 338 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 POLR2IP36954 125 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 PNLIPRP2P54317 469 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 RPL27P61353 136 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 SLC25A34Q6PIV7 304 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 OR5M1Q8NGP8 315 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 OR51E1Q8TCB6 317 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 MISP3Q96FF7 219 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 CSF3RQ99062 836 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 COA3Q9Y2R0 106 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 IQGAP1P46940 1657 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 PPRC1Q5VV67 1664 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 VWDEQ8N2E2 1590 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 NPIPB6E9PJ23 425 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 SOX15O60248 233 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 CST5P28325 142 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 IL10RAQ13651 578 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 MRPL54Q6P161 138 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 ABHD3Q8WU67 409 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 PELI1Q96FA3 418 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 TREX1Q9NSU2 369 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 TECRQ9NZ01 308 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 JKAMPQ9P055 326 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 TCFL5Q9UL49 500 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 SLC5A6Q9Y289 635 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 ADGRB2O60241 1585 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 PPM1DO15297 605 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 HCRTR1O43613 425 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 CD74P04233 296 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 EDN1P05305 212 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 LGALS3P17931 250 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 ZXDAP98168 799 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 MRPL58Q14197 206 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 FAAP20Q6NZ36 180 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 ASCL4Q6XD76 172 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 GLDNQ6ZMI3 551 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 GDF7Q7Z4P5 450 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 OSTM1Q86WC4 334 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 SLC38A5Q8WUX1 472 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 TOE1Q96GM8 510 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 IFITM5A6NNB3 132 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 B4GALT3O60512 393 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 IGHA1P01876 353 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 IGHA2P01877 340 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 SOD2P04179 222 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 ARG1P05089 322 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 ACRP10323 421 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 CYBAP13498 195 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 ZNF788Q6ZQV5 615 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 OR5C1Q8NGR4 320 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 PTX4Q96A99 478 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 RPEQ96AT9 228 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 SORT1Q99523 831 aa7.35□□□□□ -1.23
CTNND1-231ENST00000532463 PEF1Q9UBV8 284 aaKnown RBP7.35□□□□□ -1.23
CTNND1-231ENST00000532463 TRGV10A0A0A0MS01 117 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 FGF18O76093 207 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 UTS2O95399 124 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 HNRNPA1P09651 372 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTNND1-231ENST00000532463 TBXA2RP21731 343 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 FPR2P25090 351 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 PRRX1P54821 245 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 CTF1Q16619 201 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 PABPC1L2AQ5JQF8 200 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 MOB3BQ86TA1 216 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 APCDD1Q8J025 514 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 ZNF764Q96H86 408 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-231ENST00000532463 EGLN2Q96KS0 407 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 PMCHL2Q9BQD1 86 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 SLC25A22Q9H936 323 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 STARD5Q9NSY2 213 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 A0A1B0GV90 55 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 SLC2A10O95528 541 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 CRYBA1P05813 215 aa7.34□□□□□ -1.23
CTNND1-231ENST00000532463 PRLHRP49683 370 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms