RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 OR5P3Q8WZ94 311 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 TECTBQ96PL2 329 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 MICU1Q9BPX6 476 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 PLEKHA1Q9HB21 404 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 LRCH1Q9Y2L9 728 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 SLC3A1Q07837 685 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 RIN1Q13671 783 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 HFEQ30201 348 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 CEACAM21Q3KPI0 293 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 KCTD21Q4G0X4 260 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 RDH10Q8IZV5 341 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 Q8TCH9 128 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 PP6455Q8WZ26 134 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 PIGCQ92535 297 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 YIPF5Q969M3 257 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 RTL8AQ9BWD3 113 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 CHST5Q9GZS9 411 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 CCDC90BQ9GZT6 254 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 GCM1Q9NP62 436 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 ISYNA1Q9NPH2 558 aa17.56■□□□□ 0.4
CD44-222ENST00000526025 ZNF275Q9NSD4 429 aaPredicted RBP17.56■□□□□ 0.4
CD44-222ENST00000526025 SIRT4Q9Y6E7 314 aaPredicted RBP17.56■□□□□ 0.4
CD44-222ENST00000526025 TMEM210A6NLX4 147 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 ZNF850A8MQ14 1090 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 PLPP2O43688 288 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 SLC25A16P16260 332 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 COL8A2P25067 703 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 GPR50Q13585 617 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 SPRNQ5BIV9 151 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 FAM76BQ5HYJ3 339 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 WFDC11Q8NEX6 87 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 OR5A2Q8NGI9 324 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 PGLYRP3Q96LB9 341 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 HIST1H2AAQ96QV6 131 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 PDCD1LG2Q9BQ51 273 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 PIMREGQ9BSJ6 248 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 PPP1R3CQ9UQK1 317 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 ZNF281Q9Y2X9 895 aa17.55■□□□□ 0.4
CD44-222ENST00000526025 FLNAP21333 2647 aaKnown RBP17.54■□□□□ 0.4
CD44-222ENST00000526025 LOC100289279A0A1B0GTE1 492 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 OR5B21A6NL26 309 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 VWC2LB2RUY7 222 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 GATBO75879 557 aaKnown RBP17.54■□□□□ 0.4
CD44-222ENST00000526025 NRASP01111 189 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 YIF1BQ5BJH7 314 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 UTS2BQ765I0 119 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 TGIF2LYQ8IUE0 185 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 SVOPQ8N4V2 548 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 OR10AC1Q8NH08 325 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 GPR148Q8TDV2 347 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 HPSE2Q8WWQ2 592 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 HPS1Q92902 700 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 Q96MF0 132 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 OR5M11Q96RB7 305 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 TLNRD1Q9H1K6 362 aa17.54■□□□□ 0.4
CD44-222ENST00000526025 ANKRD61A6NGH8 418 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 FSTL3O95633 263 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 SERPINA3P01011 423 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 GNG3P63215 75 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 DOC2BQ14184 412 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 MED22Q15528 200 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 OR51A4Q8NGJ6 313 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 OR13C3Q8NGS6 347 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 RGP1Q92546 391 aaPredicted RBP17.53■□□□□ 0.4
CD44-222ENST00000526025 GHSRQ92847 366 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 DVL3Q92997 716 aaPredicted RBP17.53■□□□□ 0.4
CD44-222ENST00000526025 FN3KRPQ9HA64 309 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 TMEM106BQ9NUM4 274 aa17.53■□□□□ 0.4
CD44-222ENST00000526025 IGHV4-30-2A0A087WSY4 118 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 LRRC30A6NM36 301 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 CLDN25C9JDP6 229 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 LYNX1G3V0Z9 82 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 CDC14BO60729 498 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 ALX3O95076 343 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 LYNX1P0DP58 116 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 ZNF20P17024 532 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 MLLT11Q13015 90 aaPredicted RBP17.52■□□□□ 0.4
CD44-222ENST00000526025 PLCXD3Q63HM9 321 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 ZNF773Q6PK81 442 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 ZNF367Q7RTV3 350 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 PARP16Q8N5Y8 322 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 OR1M1Q8NGA1 313 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 THRSPQ92748 146 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 ADAT3Q96EY9 351 aaPredicted RBP17.52■□□□□ 0.4
CD44-222ENST00000526025 PPP1R3EQ9H7J1 279 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 ACOT13Q9NPJ3 140 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 DHDHQ9UQ10 334 aa17.52■□□□□ 0.4
CD44-222ENST00000526025 TRBV5-5A0A0J9YX44 114 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 TNFAIP8O95379 198 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 CD2P06729 351 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 CELP19835 753 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 CFHR2P36980 270 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 NR4A2P43354 598 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 CHN2P52757 468 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 ZNF154Q13106 437 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 TPBGQ13641 420 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 CNN3Q15417 329 aaKnown RBP17.51■□□□□ 0.39
CD44-222ENST00000526025 CARTPTQ16568 116 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 MOB3CQ70IA8 216 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 WDR86Q86TI4 376 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms