RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RASSF4Q9H2L5 321 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 RGCCQ9H4X1 137 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 Q9H521 79 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUSP21Q9H596 190 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 PLEKHA1Q9HB21 404 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 BARX1Q9HBU1 254 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 GCM1Q9NP62 436 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 INPP5EQ9NRR6 644 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 CYSLTR2Q9NS75 346 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 SNTG1Q9NSN8 517 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM106BQ9NUM4 274 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 BABAM2Q9NXR7 383 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TAS2R4Q9NYW5 299 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 CNOT2Q9NZN8 540 aaKnown RBP3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 DUX4Q9UBX2 424 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 ZDHHC8Q9ULC8 765 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 PPP1R3CQ9UQK1 317 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TPRKBQ9Y3C4 175 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 WIPI2Q9Y4P8 454 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 V9GYS6 101 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 TACC2O95359 2948 aa3.88□□□□□ -1.79
CHMP4A-202ENST00000524955 ANKHD1Q8IWZ3 2542 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 IGKV1-27A0A075B6S5 117 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 A0A096LNT2 108 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 IGKV1-9A0A0C4DH69 117 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 LOC390937A0A1W2PQ73 354 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 MAGEA13PA6NCF6 341 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 ANXA2P2A6NMY6 339 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 VWC2LB2RUY7 222 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CLDN25C9JDP6 229 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM178BH3BS89 294 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 OGG1O15527 345 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 AKR7A2O43488 359 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 SPRY1O43609 319 aaPredicted RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 SYNGR1O43759 233 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 MTRF1O75570 445 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 LY6G6DO95868 133 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CST4P01036 141 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 GYPAP02724 150 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CD55P08174 381 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 ADH4P08319 380 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CCDC159P0C7I6 412 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 UBCP0CG48 685 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF20P17024 532 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 TNFRSF1AP19438 455 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 ACHEP22303 614 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CCL1P22362 96 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 USF1P22415 310 aaPredicted RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 TUBG1P23258 451 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CFL1P23528 166 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 LIPAP38571 399 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 DDOSTP39656 456 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 POU3F4P49335 361 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 SRP9P49458 86 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CEBPDP49716 269 aaPredicted RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 WNT4P56705 351 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 RPS25P62851 125 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 EMX1Q04741 257 aaPredicted RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 ZNF154Q13106 437 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 RIN1Q13671 783 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 IRF3Q14653 427 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 ZMYND11Q15326 602 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 SPHARQ15513 63 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 ZMAT1Q5H9K5 638 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 FAM209AQ5JX71 171 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 RBM48Q5RL73 367 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CLVS2Q5SYC1 327 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 TMEM244Q5VVB8 128 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 LIPKQ5VXJ0 399 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 ASPHD2Q6ICH7 369 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 FDX2Q6P4F2 183 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 RPL22L1Q6P5R6 122 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 HAGHLQ6PII5 290 aaPredicted RBP3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 DNM1P46Q6ZS02 220 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 IL17RELQ6ZVW7 336 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 SATL1Q86VE3 508 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CALHM1Q8IU99 346 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 PLPP7Q8NBV4 271 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 SCCPDHQ8NBX0 429 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 OR1M1Q8NGA1 313 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 OR51A2Q8NGJ7 313 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 OR52N1Q8NH53 320 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CLDND2Q8NHS1 167 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 LRRC29Q8WV35 223 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 SLAMF9Q96A28 289 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 PGLYRP3Q96LB9 341 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 OR14A2Q96R54 314 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 DIRC2Q96SL1 478 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 GAL3ST1Q99999 423 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 MICU1Q9BPX6 476 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 RTL8AQ9BWD3 113 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 MND1Q9BWT6 205 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 WDR13Q9H1Z4 485 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 OPA3Q9H6K4 179 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 MOB1AQ9H8S9 216 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 CHODLQ9H9P2 273 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 FN3KRPQ9HA64 309 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 TRIM36Q9NQ86 728 aa3.87□□□□□ -1.79
CHMP4A-202ENST00000524955 TUBG2Q9NRH3 451 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms