RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 TRAV27A0A087WT01 109 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ARPC4-TTLL3A0A0A6YYG9 625 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 TRBV4-1A0A0J9YWV2 114 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 CDC42EP2O14613 210 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ABCD4O14678 606 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 GADD45GO95257 159 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 QDPRP09417 244 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 PGA4P0DJD7 388 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 PGA3P0DJD8 388 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ACADSP16219 412 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 RPL4P36578 427 aaKnown RBP5.82□□□□□ -1.48
SDCBP-208ENST00000520228 IFNGR2P38484 337 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 RPS4XP62701 263 aaKnown RBP5.82□□□□□ -1.48
SDCBP-208ENST00000520228 TRAP1Q12931 704 aaKnown RBP5.82□□□□□ -1.48
SDCBP-208ENST00000520228 DEFB113Q30KQ7 82 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ANKDD1AQ495B1 522 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ZBED5Q49AG3 693 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 PHLDA2Q53GA4 152 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 PIWIL3Q7Z3Z3 882 aaKnown RBP5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF611Q8N823 705 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 SYT14Q8NB59 555 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 KBTBD8Q8NFY9 601 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 OR4K5Q8NGD3 323 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 CCDC107Q8WV48 283 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ASB9Q96DX5 294 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 FEVQ99581 238 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 CCL19Q99731 98 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 FOXC2Q99958 501 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 MRPL13Q9BYD1 178 aaKnown RBP5.82□□□□□ -1.48
SDCBP-208ENST00000520228 TRIM15Q9C019 465 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 TXNIPQ9H3M7 391 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 STX18Q9P2W9 335 aaKnown RBP5.82□□□□□ -1.48
SDCBP-208ENST00000520228 TMCC3Q9ULS5 477 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 AURKCQ9UQB9 309 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ABCA4P78363 2273 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 ARHGAP21Q5T5U3 1957 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 CSMD2Q7Z408 3487 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 CACNA1DQ01668 2161 aa5.82□□□□□ -1.48
SDCBP-208ENST00000520228 HRNRQ86YZ3 2850 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-208ENST00000520228 MAP1AP78559 2803 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-208ENST00000520228 HCFC1P51610 2035 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 SH3PXD2BA1X283 911 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 A6NIZ1 184 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 CENPBD1B2RD01 187 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 SHISA9B4DS77 424 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ATP6V0E1O15342 81 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 OR10H3O60404 316 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 SMPD2O60906 423 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ENTPD5O75356 428 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 TRMUO75648 421 aaKnown RBP5.81□□□□□ -1.48
SDCBP-208ENST00000520228 NDUFB2O95178 105 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 HLA-HP01893 362 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 PATE4P0C8F1 98 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 CFC1P0CG37 223 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 CD79AP11912 226 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 NR2C1P13056 603 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 B4GALT1P15291 398 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 CBR1P16152 277 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ACHEP22303 614 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 MT3P25713 68 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 RRM2P31350 389 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ARR3P36575 388 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ACVR1BP36896 505 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 OMPP47874 163 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 RAP1BP61224 184 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 RPL27P61353 136 aaKnown RBP5.81□□□□□ -1.48
SDCBP-208ENST00000520228 RAP1AP62834 184 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ERVK-25P63136 954 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 CHRNB3Q05901 458 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ACSM1Q08AH1 577 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 BNIP1Q12981 228 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 HIST3H3Q16695 136 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 KIAA1644Q3SXP7 199 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ELFN2Q5R3F8 820 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 FAM53AQ6NSI3 398 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ZER1Q7Z7L7 766 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 MDP1Q86V88 176 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ARIH2OSQ8N7S6 290 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 LRRC75AQ8NAA5 344 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 NOXO1Q8NFA2 376 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 SMAP2Q8WU79 429 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-208ENST00000520228 MCHR2Q969V1 340 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 SLC38A2Q96QD8 506 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 TSPAN32Q96QS1 320 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 RBP7Q96R05 134 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 KCNS3Q9BQ31 491 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 KATNB1Q9BVA0 655 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 DAPK2Q9UIK4 370 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF346Q9UL40 294 aaKnown RBP5.81□□□□□ -1.48
SDCBP-208ENST00000520228 SIGLEC7Q9Y286 467 aa5.81□□□□□ -1.48
SDCBP-208ENST00000520228 ANKRD17O75179 2603 aaKnown RBP5.81□□□□□ -1.48
SDCBP-208ENST00000520228 AKAP6Q13023 2319 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 IGHV1-18A0A0C4DH31 117 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 IGHV4-61A0A0C4DH41 118 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 E7EQL1 145 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 ATP6V1G2-DDX39BF2Z307 99 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 TNFRSF11BO00300 401 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 XKRYO14609 159 aa5.8□□□□□ -1.48
SDCBP-208ENST00000520228 ARHGEF9O43307 516 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms