RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 OR2T29Q8NH02 315 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 SGMS2Q8NHU3 365 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 SPRYD4Q8WW59 207 aaPredicted RBP7.09□□□□□ -1.27
PABPC1-202ENST00000517403 EDARADDQ8WWZ3 215 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 RPL3LQ92901 407 aaKnown RBP7.09□□□□□ -1.27
PABPC1-202ENST00000517403 LHX4Q969G2 390 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 REEP6Q96HR9 211 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 GAFA1Q96PS6 74 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 FEVQ99581 238 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 CITED1Q99966 193 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 NDEL1Q9GZM8 345 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 TLNRD1Q9H1K6 362 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 SNTG1Q9NSN8 517 aa7.09□□□□□ -1.27
PABPC1-202ENST00000517403 MRPL15Q9P015 296 aaKnown RBP7.09□□□□□ -1.27
PABPC1-202ENST00000517403 RPUSD1Q9UJJ7 312 aaKnown RBP7.09□□□□□ -1.27
PABPC1-202ENST00000517403 SAMHD1Q9Y3Z3 626 aaKnown RBP7.09□□□□□ -1.27
PABPC1-202ENST00000517403 WNK1Q9H4A3 2382 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 IGKV1D-17A0A075B6S4 117 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 IFNL4K9M1U5 179 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 CDIPTO14735 213 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 GPR137BO60478 399 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 SRSF10O75494 262 aaKnown RBP7.08□□□□□ -1.28
PABPC1-202ENST00000517403 TOX4O94842 621 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 ZNF823P16415 610 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 CEBPDP49716 269 aaPredicted RBP7.08□□□□□ -1.28
PABPC1-202ENST00000517403 GSK3AP49840 483 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 RAG2P55895 527 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 SCAND1P57086 179 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 SMIM11AP58511 58 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 FBLN7Q53RD9 439 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 TMEM177Q53S58 311 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 HSP90B2PQ58FF3 399 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 LDLRAD2Q5SZI1 272 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 PLBD1Q6P4A8 553 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 BTNL3Q6UXE8 466 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 TREML4Q6UXN2 200 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 CD300LDQ6UXZ3 194 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 TRPM8Q7Z2W7 1104 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 BATF2Q8N1L9 274 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 CLRN3Q8NCR9 226 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 RNF141Q8WVD5 230 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 CANT1Q8WVQ1 401 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 ST8SIA4Q92187 359 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 ZNF488Q96MN9 340 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 INTS14Q96SY0 518 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 SP140LQ9H930 580 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 FN3KRPQ9HA64 309 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 KRCC1Q9NPI7 259 aaPredicted RBP7.08□□□□□ -1.28
PABPC1-202ENST00000517403 KAAG1Q9UBP8 84 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 ZNF222Q9UK12 451 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 SIGLEC9Q9Y336 463 aa7.08□□□□□ -1.28
PABPC1-202ENST00000517403 hCG_1807616A0A1W2PRN6 198 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 ZNF850A8MQ14 1090 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 AKR7A2O43488 359 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 GMDSO60547 372 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 MITFO75030 526 aaPredicted RBP7.07□□□□□ -1.28
PABPC1-202ENST00000517403 IGLV3-1P01715 115 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 ANXA2P07355 339 aaKnown RBP7.07□□□□□ -1.28
PABPC1-202ENST00000517403 MRPL3P09001 348 aaKnown RBP7.07□□□□□ -1.28
PABPC1-202ENST00000517403 JUNBP17275 347 aaPredicted RBP7.07□□□□□ -1.28
PABPC1-202ENST00000517403 FMO3P31513 532 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 GRK5P34947 590 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 IER3P46695 156 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 TGM4P49221 684 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 PROK1P58294 105 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 IL13RA1P78552 427 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 CDK5Q00535 292 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 DEFA6Q01524 100 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 MALLQ13021 153 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 PRDX4Q13162 271 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 SCGB2A2Q13296 93 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 IKZF1Q13422 519 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 TRIM25Q14258 630 aaKnown RBP7.07□□□□□ -1.28
PABPC1-202ENST00000517403 METTL11BQ5VVY1 283 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 ASPHD2Q6ICH7 369 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 C16orf89Q6UX73 402 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 PLEKHG7Q6ZR37 379 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 Q6ZSV7 163 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 SSX6Q7RTT6 188 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 CPLX4Q7Z7G2 160 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 LDLRAD3Q86YD5 345 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 C1orf87Q8N0U7 546 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 C11orf42Q8N5U0 333 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 TEX29Q8N6K0 151 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 OR2T33Q8NG76 320 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 OR11L1Q8NGX0 322 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 OTOSQ8NHW6 89 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 LINC01006Q8NI28 216 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 PPP1R35Q8TAP8 253 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 SPTSSAQ969W0 71 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 SLC25A28Q96A46 364 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 MCUR1Q96AQ8 359 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 SLC7A6OSQ96CW6 309 aaPredicted RBP7.07□□□□□ -1.28
PABPC1-202ENST00000517403 PLEKHA8Q96JA3 519 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 CCT8L2Q96SF2 557 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 CHID1Q9BWS9 393 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 PAPOLGQ9BWT3 736 aaKnown RBP7.07□□□□□ -1.28
PABPC1-202ENST00000517403 OR51V1Q9H2C8 321 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 MAGIXQ9H6Y5 334 aa7.07□□□□□ -1.28
PABPC1-202ENST00000517403 FAM206AQ9NX38 181 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms