RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 Q6ZSR3 168 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ELMOD2Q8IZ81 293 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 TEX29Q8N6K0 151 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ACBD7Q8N6N7 88 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 OR10H4Q8NGA5 316 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 OR8B12Q8NGG6 310 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 OR11L1Q8NGX0 322 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 C10orf35Q96D05 121 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 RNFT2Q96EX2 444 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 SIGLEC11Q96RL6 698 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 JAM3Q9BX67 310 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 PBOV1Q9GZY1 135 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 FN3KRPQ9HA64 309 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 KCNS2Q9ULS6 477 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 EXOGQ9Y2C4 368 aaKnown RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 CSPG4Q6UVK1 2322 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 TLN2Q9Y4G6 2542 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 ZANQ9Y493 2812 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 PPIAL4EA0A075B759 164 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 PPIAL4CA0A0B4J2A2 164 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 DAPL1A0PJW8 107 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 OR5B21A6NL26 309 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 PPIAL4DF5H284 164 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 F5H5P2 479 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 TMEM178BH3BS89 294 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 IGHV2-70P01814 119 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 IGHV2-5P01817 119 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 IGHA1P01876 353 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 CSTBP04080 98 aaKnown RBP6.9□□□□□ -1.3
NEDD4-210ENST00000513957 UBCP0CG48 685 aaKnown RBP6.9□□□□□ -1.3
NEDD4-210ENST00000513957 PPIAL4FP0DN26 164 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 HNF1AP20823 631 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 CCL1P22362 96 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 CA6P23280 308 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 GATA3P23771 443 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 CFHR2P36980 270 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 CAPGP40121 348 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 HCCSP53701 268 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 DVL1P1P54792 670 aaPredicted RBP6.9□□□□□ -1.3
NEDD4-210ENST00000513957 SLC34A1Q06495 639 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 RIPPLY1Q0D2K3 151 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 MAB21L1Q13394 359 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 MED21Q13503 144 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 CDONQ4KMG0 1287 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 FAM209BQ5JX69 171 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 LIPNQ5VXI9 398 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 FDX2Q6P4F2 183 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 DOK3Q7L591 496 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 SYS1Q8N2H4 156 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 GALNT4Q8N4A0 578 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 KLHL36Q8N4N3 616 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 DHRSXQ8N5I4 330 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 YIPF7Q8N8F6 280 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 MAPK1IP1LQ8NDC0 245 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 SEMA6DQ8NFY4 1073 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 OR8S1Q8NH09 359 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 OR51F2Q8NH61 342 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 CLDND2Q8NHS1 167 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 MSI2Q96DH6 328 aaKnown RBP6.9□□□□□ -1.3
NEDD4-210ENST00000513957 TECTBQ96PL2 329 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 SMR3AQ99954 134 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 GAL3ST1Q99999 423 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 MICU1Q9BPX6 476 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 ADI1Q9BV57 179 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 RTL8AQ9BWD3 113 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 PAPOLGQ9BWT3 736 aaKnown RBP6.9□□□□□ -1.3
NEDD4-210ENST00000513957 GSX1Q9H4S2 264 aaPredicted RBP6.9□□□□□ -1.3
NEDD4-210ENST00000513957 ZNF665Q9H7R5 613 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 RNPEPL1Q9HAU8 725 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 ZNF319Q9P2F9 582 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 MRM2Q9UI43 246 aaKnown RBP6.9□□□□□ -1.3
NEDD4-210ENST00000513957 CDC42EP3Q9UKI2 254 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 OR52A1Q9UKL2 312 aa6.9□□□□□ -1.3
NEDD4-210ENST00000513957 MTORP42345 2549 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 LRP5LA4QPB2 252 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 C5orf63A6NC05 138 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 ERICH4A6NGS2 130 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 PRR32B1ATL7 298 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 H0YHG0 523 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 H0YL77 283 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 PSMD9O00233 223 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 NDUFA2O43678 99 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 LMX1BO60663 402 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 FAM20BO75063 409 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 TTRP02766 147 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 HLA-DPB1P04440 258 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 ISG15P05161 165 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 MSMBP08118 114 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 DCKP27707 260 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 CCR9P51686 369 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 LMO4P61968 165 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 ADARB1P78563 741 aaKnown RBP6.89□□□□□ -1.31
NEDD4-210ENST00000513957 SRSF2Q01130 221 aaKnown RBP6.89□□□□□ -1.31
NEDD4-210ENST00000513957 LRRC36Q1X8D7 754 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 KRTAP21-3Q3LHN1 58 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 FAM76BQ5HYJ3 339 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 TOR2AQ5JU69 321 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 SSX6Q7RTT6 188 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 THAP5Q7Z6K1 395 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms