RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 CAPN7Q9Y6W3 813 aa9.91□□□□□ -0.82
SDHA-215ENST00000512962 PTBP3O95758 552 aaKnown RBP9.9□□□□□ -0.82
SDHA-215ENST00000512962 IFNA8P32881 189 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 BMXP51813 675 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 GK2Q14410 553 aaPredicted RBP9.9□□□□□ -0.82
SDHA-215ENST00000512962 LRRC23Q53EV4 343 aaPredicted RBP9.9□□□□□ -0.82
SDHA-215ENST00000512962 MESTQ5EB52 335 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 C11orf88Q6PI97 169 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 ARPINQ7Z6K5 226 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 OFCC1Q8IZS5 231 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 RP9Q8TA86 221 aaKnown RBP9.9□□□□□ -0.82
SDHA-215ENST00000512962 LZICQ8WZA0 190 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 BPIFA2Q96DR5 249 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 OR5M11Q96RB7 305 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 CCL13Q99616 98 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 RANBP3Q9H6Z4 567 aaPredicted RBP9.9□□□□□ -0.82
SDHA-215ENST00000512962 CMTM6Q9NX76 183 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 ADAM18Q9Y3Q7 739 aa9.9□□□□□ -0.82
SDHA-215ENST00000512962 TRAV27A0A087WT01 109 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.89□□□□□ -0.83
SDHA-215ENST00000512962 PAHP00439 452 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 ZNF26P17031 533 aaPredicted RBP9.89□□□□□ -0.83
SDHA-215ENST00000512962 CA6P23280 308 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 EMX1Q04741 257 aaPredicted RBP9.89□□□□□ -0.83
SDHA-215ENST00000512962 EGFEM1PQ0D2K5 195 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 AQP6Q13520 282 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 WDR38Q5JTN6 314 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 COLCA1Q6ZS62 124 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 SLC15A3Q8IY34 581 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 RNF113BQ8IZP6 322 aaKnown RBP9.89□□□□□ -0.83
SDHA-215ENST00000512962 PAPD5Q8NDF8 572 aaKnown RBP9.89□□□□□ -0.83
SDHA-215ENST00000512962 NPRL2Q8WTW4 380 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 APOBEC3DQ96AK3 386 aaPredicted RBP9.89□□□□□ -0.83
SDHA-215ENST00000512962 RCN3Q96D15 328 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 TPD52L3Q96J77 140 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 COG8Q96MW5 612 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 NKX3-1Q99801 234 aaPredicted RBP9.89□□□□□ -0.83
SDHA-215ENST00000512962 C1orf123Q9NWV4 160 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 CAB39Q9Y376 341 aaPredicted RBP9.89□□□□□ -0.83
SDHA-215ENST00000512962 CSMD3Q7Z407 3707 aa9.89□□□□□ -0.83
SDHA-215ENST00000512962 A6NIZ1 184 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 FFAR1O14842 300 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 ECDO95905 644 aaPredicted RBP9.88□□□□□ -0.83
SDHA-215ENST00000512962 LHBP01229 141 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 IFNW1P05000 195 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 IFI30P13284 250 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 GCSHP23434 173 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 EEF1B2P24534 225 aaKnown RBP9.88□□□□□ -0.83
SDHA-215ENST00000512962 RAP1BP61224 184 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 RAP1AP62834 184 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 PRKCDQ05655 676 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 TRAM2Q15035 370 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 MEP1BQ16820 701 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 KRTAP27-1Q3LI81 207 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 TCTEX1D4Q5JR98 221 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 CASC10Q5T4H9 136 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 XP32Q5T750 250 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 TEX36Q5VZQ5 186 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 C8orf82Q6P1X6 216 aaPredicted RBP9.88□□□□□ -0.83
SDHA-215ENST00000512962 CORO6Q6QEF8 472 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 VTCN1Q7Z7D3 282 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 WDR86Q86TI4 376 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 NRMQ8IXM6 262 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 SPERTQ8NA61 448 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 SLC7A13Q8TCU3 470 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 ERGIC1Q969X5 290 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 SPSB4Q96A44 273 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 NEU1Q99519 415 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 HOPXQ9BPY8 73 aaPredicted RBP9.88□□□□□ -0.83
SDHA-215ENST00000512962 WACQ9BTA9 647 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 ADAT1Q9BUB4 502 aaKnown RBP9.88□□□□□ -0.83
SDHA-215ENST00000512962 FNDC11Q9BVV2 318 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 FN3KRPQ9HA64 309 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 TBC1D23Q9NUY8 699 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 KAAG1Q9UBP8 84 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 LHFPL6Q9Y693 200 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 U3KQK5 164 aa9.88□□□□□ -0.83
SDHA-215ENST00000512962 TRAV38-1A0A0B4J264 116 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 TEX13CA0A0J9YWL9 993 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 ACOT8O14734 319 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 COX4I1P13073 169 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 SLC9A3P48764 834 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 RGS6P49758 472 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 HIST1H3AP68431 136 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 LIPEQ05469 1076 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 SF3A3Q12874 501 aaKnown RBP eCLIP9.87□□□□□ -0.83
SDHA-215ENST00000512962 BLMHQ13867 455 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 PCK2Q16822 640 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 LRRC75BQ2VPJ9 315 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 HIST2H3PS2Q5TEC6 136 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 HACD2Q6Y1H2 254 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 TMPRSS11FQ6ZWK6 438 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 HIST2H3AQ71DI3 136 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 OAFQ86UD1 273 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 C11orf53Q8IXP5 236 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 DYNAPQ8N1N2 210 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 Q8N2B8 174 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 OR13C2Q8NGS9 318 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 OR51A7Q8NH64 312 aa9.87□□□□□ -0.83
SDHA-215ENST00000512962 ACOT11Q8WXI4 607 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms