RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PRAMEF5Q5TYX0 476 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 PRAMEF6Q5VXH4 476 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF322Q6U7Q0 402 aaPredicted RBP0.31□□□□□ -2.36
PDGFC-208ENST00000512711 TMEM107Q6UX40 140 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 TMPRSS11AQ6ZMR5 421 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 TMEM144Q7Z5S9 345 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 Q8NAQ8 132 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 BPIFCQ8NFQ6 507 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 OR10D4PQ8NGN7 298 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 OR5AR1Q8NGP9 310 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 LYPD6BQ8NI32 183 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 YIPF5Q969M3 257 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 YIPF6Q96EC8 236 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 SGTBQ96EQ0 304 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 TSGA13Q96PP4 275 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 HIGD2AQ9BW72 106 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF286AQ9HBT8 521 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 MRM3Q9HC36 420 aaKnown RBP0.31□□□□□ -2.36
PDGFC-208ENST00000512711 ACP6Q9NPH0 428 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 TMEM38BQ9NVV0 291 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 OTOFQ9HC10 1997 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF608Q9ULD9 1512 aaPredicted RBP0.3□□□□□ -2.36
PDGFC-208ENST00000512711 IGKV1D-43A0A0B4J1Z2 117 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 A0A1B0GU33 70 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 FAM240BA0A1B0GVZ2 78 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 TMEM72A0PK05 275 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 IGKV2-29A2NJV5 120 aaPredicted RBP0.3□□□□□ -2.36
PDGFC-208ENST00000512711 IGLL5B9A064 214 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 G3V3Q6 166 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 EIF3HO15372 352 aaKnown RBP eCLIP0.3□□□□□ -2.36
PDGFC-208ENST00000512711 SLC19A2O60779 497 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 OR2J3O76001 311 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 LSM8O95777 96 aaKnown RBP0.3□□□□□ -2.36
PDGFC-208ENST00000512711 CD160O95971 181 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 HPRT1P00492 218 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 IGHV3-53P01767 116 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 TNNI1P19237 187 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 RAB4AP20338 218 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 MYL9P24844 172 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 CFHR2P36980 270 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 PPICP45877 212 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 SERPINB8P50452 374 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 CUL2Q13617 745 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 HHATQ5VTY9 493 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 CYHR1Q6ZMK1 362 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 RUFY3Q7L099 469 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 COMTD1Q86VU5 262 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 OR5K2Q8NHB8 316 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 ALS2CR12Q96Q35 445 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 TRIB3Q96RU7 358 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 SFXN3Q9BWM7 321 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 TTTY12Q9BZ98 90 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 TUBA4BQ9H853 241 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 ELP1O95163 1332 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 KANK1Q14678 1352 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 CCDC88CQ9P219 2028 aa0.3□□□□□ -2.36
PDGFC-208ENST00000512711 LCTP09848 1927 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 A0A0B4J2C4 111 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF860A6NHJ4 632 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 SIRPB1O00241 398 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 GNRHRP30968 328 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 FABP6P51161 128 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF140P52738 457 aaPredicted RBP0.29□□□□□ -2.36
PDGFC-208ENST00000512711 RPL23AP62750 156 aaKnown RBP0.29□□□□□ -2.36
PDGFC-208ENST00000512711 DHRS2Q13268 280 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 SS18Q15532 418 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 LGALSLQ3ZCW2 172 aaPredicted RBP0.29□□□□□ -2.36
PDGFC-208ENST00000512711 Q6ZRU5 148 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 TCF23Q7RTU1 214 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 SLC16A14Q7RTX9 510 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 FAM57AQ8TBR7 257 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 NT5C3BQ969T7 300 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 ILKAPQ9H0C8 392 aaPredicted RBP0.29□□□□□ -2.36
PDGFC-208ENST00000512711 CYP3A43Q9HB55 503 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 MRPL16Q9NX20 251 aaKnown RBP0.29□□□□□ -2.36
PDGFC-208ENST00000512711 ACOT9Q9Y305 439 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 CACNA1SQ13698 1873 aa0.29□□□□□ -2.36
PDGFC-208ENST00000512711 C19orf71A6NCJ1 209 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 M0R3G1 203 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 AP3B1O00203 1094 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 NDUFAB1O14561 156 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 PSPHP1O15172 72 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 IGKV1D-33P01593 117 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 IGKV1-33P01594 117 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 ANGP03950 147 aaKnown RBP0.28□□□□□ -2.36
PDGFC-208ENST00000512711 CGB3P0DN86 165 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 LYNX1P0DP58 116 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF22P17026 224 aaPredicted RBP0.28□□□□□ -2.36
PDGFC-208ENST00000512711 PRPHP41219 470 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 TUFMP49411 452 aaKnown RBP0.28□□□□□ -2.36
PDGFC-208ENST00000512711 GBX2P52951 348 aaPredicted RBP0.28□□□□□ -2.36
PDGFC-208ENST00000512711 ATP5G2Q06055 141 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 PRDX4Q13162 271 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 HES1Q14469 280 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 MRPL2Q5T653 305 aaKnown RBP0.28□□□□□ -2.36
PDGFC-208ENST00000512711 C22orf42Q6IC83 251 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 NBPF5PQ86XG9 351 aaPredicted RBP0.28□□□□□ -2.36
PDGFC-208ENST00000512711 ITPRIPQ8IWB1 547 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 OR2M7Q8NG81 312 aa0.28□□□□□ -2.36
PDGFC-208ENST00000512711 OR7G2Q8NG99 324 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms