RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 IKZF1Q13422 519 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 LRRC10Q5BKY1 277 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 STUMQ69YW2 141 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 PDZD9Q8IXQ8 264 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 CMTM4Q8IZR5 234 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 OTOSQ8NHW6 89 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 GIPC3Q8TF64 312 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 NPRL2Q8WTW4 380 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 LRTOMTQ8WZ04 291 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 SEH1LQ96EE3 360 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 NSL1Q96IY1 281 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 LRGUKQ96M69 825 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 DNTTIP1Q9H147 329 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 DPAGT1Q9H3H5 408 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 PDP1Q9P0J1 537 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 DNAJB11Q9UBS4 358 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 ZNF391Q9UJN7 358 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 CAB39Q9Y376 341 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 FAM96BQ9Y3D0 163 aa12.11□□□□□ -0.47
CCHCR1-229ENST00000512418 NKX6-3A6NJ46 265 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 PRR23D1E9PI22 279 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 CST4P01036 141 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 CST1P01037 141 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 PRR23D2P0DMB1 279 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 CALB2P22676 271 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 ACKR3P25106 362 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 PSMA6P60900 246 aaKnown RBP12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 GUCA2AQ02747 115 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 PRDX4Q13162 271 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 ATPAF1Q5TC12 328 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 PLBD1Q6P4A8 553 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 GDPGP1Q6ZNW5 385 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 OR10Z1Q8NGY1 313 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 CCDC124Q96CT7 223 aaKnown RBP12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 PKP2Q99959 881 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 DCTN5Q9BTE1 182 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 CHID1Q9BWS9 393 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 HAO2Q9NYQ3 351 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 RNF114Q9Y508 228 aa12.1□□□□□ -0.47
CCHCR1-229ENST00000512418 ZNF850A8MQ14 1090 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 M0QZ24 198 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 TIMM23O14925 209 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 PRODHO43272 600 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 SELENOFO60613 162 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 FBP1P09467 338 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 AMY2BP19961 511 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 POU1F1P28069 291 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 TGM4P49221 684 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 PDLIM3Q53GG5 364 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 FAM76BQ5HYJ3 339 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 KCTD8Q6ZWB6 473 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 OR5T2Q8NGG2 359 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 LINC01006Q8NI28 216 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 C8orf46Q8TAG6 207 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 THEM6Q8WUY1 208 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 OR5P3Q8WZ94 311 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 RPL3LQ92901 407 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 RAB3IPQ96QF0 476 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 CCT8L2Q96SF2 557 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 WDR13Q9H1Z4 485 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 NIPAL2Q9H841 368 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 SIRT7Q9NRC8 400 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 SNTG1Q9NSN8 517 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 ZNRD1Q9P1U0 126 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 CMYA5Q8N3K9 4069 aa12.09□□□□□ -0.47
CCHCR1-229ENST00000512418 BTBD17A6NE02 478 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 HMGN1P05114 100 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 SELLP14151 372 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 EEF1B2P24534 225 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 GMFBP60983 142 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 GINS1Q14691 196 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 MIDNQ504T8 468 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 SLC35D3Q5M8T2 416 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 ZNF788Q6ZQV5 615 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 ZDHHC23Q8IYP9 409 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 ADGRG5Q8IZF4 528 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 ZSCAN4Q8NAM6 433 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 H1FXQ92522 213 aaKnown RBP12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 PIGCQ92535 297 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 MED30Q96HR3 178 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 RNF170Q96K19 258 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 LYZL4Q96KX0 146 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 MMP27Q9H306 513 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 SLC25A10Q9UBX3 287 aaPredicted RBP12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 LRP12Q9Y561 859 aa12.08□□□□□ -0.48
CCHCR1-229ENST00000512418 RNASEK-C17orf49H0YIS7 233 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 GNGT2O14610 69 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 NPFFO15130 113 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 AKR7A2O43488 359 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 CLPXO76031 633 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 OSMP13725 252 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 HOXB6P17509 224 aaKnown RBP12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 DCTDP32321 178 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 PROK1P58294 105 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 TAF9Q16594 264 aa12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 DHRS7BQ6IAN0 325 aaPredicted RBP12.07□□□□□ -0.48
CCHCR1-229ENST00000512418 C1orf122Q6ZSJ8 110 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms